Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq73 105 6e-18
seq109 104 2e-17
seq65 95.1 1e-14
>seq73
Length=1824528
Score = 105 bits (116), Expect = 6e-18
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| || | || ||||||||||| ||||| || || ||
Sbjct 212644 CCACCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCG 212703
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||| ||||| ||| | || || | |||||||| ||
Sbjct 212704 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 212763
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| || || | | ||| || || | |||
Sbjct 212764 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 212823
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCA 21174
|| | ||| ||||||||||| || | || |||||||| |||||||
Sbjct 212824 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 212869
>seq109
Length=1431625
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | |||||||| |||| || |||||||| || ||||| || || ||
Sbjct 625538 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625479
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||||||||| ||| | || |||| || ||||| |||
Sbjct 625478 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGA 625419
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| || || | | ||| || || || |||
Sbjct 625418 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 625359
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||||||||| | || ||||| || ||||||||
Sbjct 625358 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625312
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | |||||||| |||| || |||||||| || ||||| || || ||
Sbjct 625766 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625707
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||||||||| ||| | || |||| || ||||| |||
Sbjct 625706 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGA 625647
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| || || | | ||| || || || |||
Sbjct 625646 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 625587
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||||||||| | || ||||| || ||||||||
Sbjct 625586 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625540
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007
||| ||||| || | |||||||| || | || |||||||| || ||||| ||||| ||
Sbjct 625995 TCCGCCTCGGAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 625936
Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067
|| || || | ||||| ||||| ||||| ||| | || |||| || ||||| |||
Sbjct 625935 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGG 625876
Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127
| ||| |||||||| |||||| || || | | ||| || || | |||
Sbjct 625875 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGAC 625816
Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||||||||| | || ||||| || ||||||||
Sbjct 625815 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | |||||||| |||| || |||||||| || ||||| || || ||
Sbjct 625310 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625251
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||| |||||||| | || | || || ||||| |||
Sbjct 625250 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGTTGGTCTGGGGGA 625191
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| || || | | ||| || || || |||
Sbjct 625190 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 625131
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||||||||| | || ||||| || ||||||||
Sbjct 625130 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 625084
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
||||| || || | ||||||| || | || |||||||| || ||||| || || ||
Sbjct 870845 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 870786
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||| ||||| ||| | || | || ||| ||||| |||
Sbjct 870785 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 870726
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||||| || || | | | | || || | |||
Sbjct 870725 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 870666
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || |||||||| || | ||| ||||| || ||||||||
Sbjct 870665 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 870619
>seq65
Length=1908199
Score = 95.1 bits (104), Expect = 1e-14
Identities = 156/225 (69%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | ||| |||| || | || ||||||||||| ||||| || || ||
Sbjct 1743317 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCG 1743376
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||| ||||| ||| | || || | |||||||| ||
Sbjct 1743377 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 1743436
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| || || | | ||| || || | |||
Sbjct 1743437 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 1743496
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGC 21173
|| | ||| || |||||||| || | || |||||||| ||||||
Sbjct 1743497 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 1743541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258443496252
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