Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq109 86.0 5e-12 >seq109 Length=1431625 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || |||| ||||| || || || ||| || || | Sbjct 625312 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625371 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || || ||||| || || | ||| ||| ||| Sbjct 625372 GACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAA 625431 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| |||| |||||||| |||||||| | || ||| | || | ||||||||||| Sbjct 625432 CAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 625491 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || ||||| || || || ||| ||||| | || | ||||| || Sbjct 625492 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625538 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || |||| ||||| || || || ||| || || | Sbjct 625540 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625599 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || || ||||| || || | ||| ||| ||| Sbjct 625600 GACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAA 625659 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| |||| |||||||| |||||||| | || ||| | || | ||||||||||| Sbjct 625660 CAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 625719 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || ||||| || || || ||| ||||| | || | ||||| || Sbjct 625720 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796064031858