Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq109 111 1e-19
>seq109
Length=1431625
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| ||||| ||||||||| |||||||| ||| || ||| | || ||
Sbjct 870827 ACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 870768
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || ||||| ||||||||||| || || | || |||||||| |
Sbjct 870767 AGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 870708
Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
|| || ||| | || | || | ||||| ||| ||||| | ||| ||||||||
Sbjct 870707 ATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTT 870649
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||| || ||||| || |||||||||||
Sbjct 870648 GCCCGTAAGCGTCTTGACGAAGATTTGCAT 870619
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| ||||| ||||||||| |||||||||||| || ||| | || ||
Sbjct 625976 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 625917
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| || |||||||| || || | ||||||||||||
Sbjct 625916 AGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 625857
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| | ||| ||||| | || |||||||||
Sbjct 625856 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATCGTCTTG 625797
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||| || |||||||||||
Sbjct 625796 CCGGTCAGGGTCTTGACGAAGATTTGCAT 625768
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| ||||| ||||||||| |||||||| ||| || ||| | ||
Sbjct 870374 AACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 870315
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || || || || ||||| ||||||||||| || || | || ||||||||
Sbjct 870314 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 870255
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
||| || ||| | || | || | ||||| ||| ||||| | ||| |||||
Sbjct 870254 TGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGT 870196
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||||| || ||||| || ||||| |||||
Sbjct 870195 CTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 870163
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| ||||| ||||||||| |||||||| ||| || ||| | ||
Sbjct 870602 AACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 870543
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || || || || ||||| ||||||||||| || || | || ||||||||
Sbjct 870542 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 870483
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
||| || ||| | || | || | ||||| ||| ||||| | ||| |||||
Sbjct 870482 TGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGT 870424
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||||| || ||||| || ||||| |||||
Sbjct 870423 CTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 870391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074492198087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |