Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq62 123 3e-23
>seq62
Length=232403
Score = 123 bits (136), Expect = 3e-23
Identities = 419/647 (65%), Gaps = 12/647 (2%)
Strand=Plus/Plus
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307
|||||| ||| | ||| || || | |||||| ||||| |||||||| || || | ||
Sbjct 196253 CCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAA 196312
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367
||||| | | | |||||| || || ||||| ||| || |||||| | |
Sbjct 196313 GAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAACTCGAA 196372
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
| |||| ||||| || || | ||| || || | |||| || || ||||| || ||
Sbjct 196373 GACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 196432
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
|| || | ||| | |||||||| || || || | | ||| || | || ||||| ||
Sbjct 196433 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 196492
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547
|| || || || | ||| ||| || | || || || || || | |||
Sbjct 196493 GTAGCCGTTCGTGCCCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 196552
Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCCTT 63606
|| || || || | || ||||| | ||||| ||| || | |||||| ||||||||||
Sbjct 196553 GATACCACCGGCGGTCTTGGAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 196611
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666
| || |||||| |||| | | || ||||| || | || | ||| ||||
Sbjct 196612 CAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTC 196671
Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726
| ||||| || | || || || ||||| || || | ||||| | || |||||||
Sbjct 196672 CGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGTACG 196731
Query 63727 -TCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAA 63781
| ||| | | || || || |||| |||| || || ||||||||||| |
Sbjct 196732 ATTGCAAGA-CGCGCTCGATGTCGTGACCATGGATG----CCAACGGCGACACGCATGAG 196786
Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841
||||||||| || | ||| | | ||| || || | ||||||||| || |
Sbjct 196787 CATGTGCTGCGGGCGTTCGGCTACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAG 196846
Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888
||||| || ||||| |||||||| || || || ||||| ||||
Sbjct 196847 CGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 196893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816442710160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |