Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq60 104 3e-17
seq62 102 1e-16
>seq60
Length=1146088
Score = 104 bits (114), Expect = 3e-17
Identities = 173/243 (71%), Gaps = 8/243 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||| | |||||| || || |||| ||||||||||| | ||||||| | || ||
Sbjct 223644 ATCTGGGCACAGTACAAGAAAGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACTTG 223703
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
|||||||| || |||| ||||| || | | | || ||||| | || || ||
Sbjct 223704 TCCAAGGATATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 223762
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||| | | ||||| || |||| |||||| || ||||||||||| || || | ||
Sbjct 223763 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCG 223822
Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||||||| ||| | ||| || | |||| ||| ||||| ||||| || ||||||||
Sbjct 223823 ATTCTCTGGTGAG--GTCCAGTCAGCCGAGG-CTCGATGCTTCTACGGTTTTCAAATCAT 223879
Query 125255 GAT 125257
|||
Sbjct 223880 GAT 223882
>seq62
Length=232403
Score = 102 bits (112), Expect = 1e-16
Identities = 346/531 (65%), Gaps = 6/531 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| |||||| || | | ||| | || || |||||| | | ||||| | | ||
Sbjct 196504 ACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGC 196445
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| || || ||||| || || || || || | || ||||| | || || |||
Sbjct 196444 TACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGG 196385
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||||| || || || | || | ||||| ||| |||| || || | ||
Sbjct 196384 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGGAAGTCCGC 196325
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
|| | || | || | ||| |||||| | || ||| |||| ||| |||| ||| | | |
Sbjct 196324 GCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCC 196265
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
| ||| | ||| ||| | ||||||| | ||||| || ||| || |||
Sbjct 196264 GCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGC 196205
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGT 97165
|||||||| ||| || | ||||| | |||||||| | | |||||| |
Sbjct 196204 GAAGAGTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA-T 196146
Query 97166 CGATGCACGAGAACTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| || | | |||| ||| | || | || ||| || ||||| || ||||| | || |
Sbjct 196145 CCCCGCGCAAAAACTTTGGTACGCGATTCTTGA-AGCCCAGGTCGAAACTGGCAACCCCT 196087
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATC 97283
||| |||||||| || ||| ||| | || | | |||||| || | ||||| |||
Sbjct 196086 TCATGCTCTACAAAGACGCCGCGAA-CAAAAAATCGAACCAAAAGAACCTTGGCACGATC 196028
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
||| || || |||||||| || || | |||||| | | |||||||||
Sbjct 196027 AAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAG 195977
Score = 96.9 bits (106), Expect = 5e-15
Identities = 132/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096
||||||||||| ||||||||| | || ||||| | |||||| || | ||||| ||
Sbjct 195049 ATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCGGCCGATCGA 194990
Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156
|| | || ||| |||||| |||||| |||| | || ||| |||||||| | | |
Sbjct 194989 GGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCAC-TTGTCGAGCCCAACGA-TGG 194932
Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214
|| | | || ||||| ||||| |||| ||||| || || ||||||||||||||||
Sbjct 194931 CGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGCATGTACT 194872
Query 98215 A 98215
|
Sbjct 194871 A 194871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057838303720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |