Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq109 118 1e-21 >seq109 Length=1431625 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | || || ||||| || | ||| |||||| | ||| | | Sbjct 870377 CGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA 870318 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || ||||||| |||| || || ||||| ||||| ||||| ||| Sbjct 870317 TCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTG 870258 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || | ||||||| | | | ||||| | ||||| || | ||||| Sbjct 870257 TCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATC 870198 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || || || ||||||||||| Sbjct 870197 GTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 870163 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | || || ||||| || | ||| |||||| | ||| | | Sbjct 870605 CGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA 870546 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || ||||||| |||| || || ||||| ||||| ||||| ||| Sbjct 870545 TCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTG 870486 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || | ||||||| | | | ||||| | ||||| || | ||||| Sbjct 870485 TCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATC 870426 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || || || ||||||||||| Sbjct 870425 GTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 870391 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| |||||| | ||| | |||||| Sbjct 625521 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 625462 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| || ||||||| | || ||| || ||||| ||||| || || || || | Sbjct 625461 GAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTG 625402 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| | ||| ||||| | | ||||| || | |||||| || || Sbjct 625401 GATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTT 625342 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||| Sbjct 625341 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 625312 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| |||||| | ||| | |||||| Sbjct 625749 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 625690 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| || ||||||| | || ||| || ||||| ||||| || || || || | Sbjct 625689 GAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTG 625630 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| | ||| ||||| | | ||||| || | |||||| || || Sbjct 625629 GATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTT 625570 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||| Sbjct 625569 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 625540 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| |||||| | ||| | |||||| Sbjct 625293 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 625234 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| |||| ||| || ||||| ||||| || || || || | Sbjct 625233 GAGCTGCTTGCCCGCGAAGATCAATCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTG 625174 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| | ||| ||||| | | ||||| || | |||||| || || Sbjct 625173 GATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTT 625114 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || ||||| Sbjct 625113 GCCGGTCAGGGTCTTGACGAAAATTTGCAT 625084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290376264920