Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq62 244 3e-59
>seq62
Length=232403
Score = 244 bits (270), Expect = 3e-59
Identities = 583/872 (67%), Gaps = 16/872 (2%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|||||||||||||| ||| | |||||||| || |||| |||||| | | || | ||
Sbjct 196804 GAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGACATCGAG 196745
Query 363508 GCCGCGA-TTGAAA-CATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACG 363561
|||| ||| || | || || || ||| || ||| | |||| |||||| ||
Sbjct 196744 --CGCGTCTTGCAATCGTACAACCTCATGTCTGAGCGCTACT----TCACCCACGCCTCG 196691
Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621
|| ||| | | |||||| ||||| | | | || ||| | || || || || || | |
Sbjct 196690 CCGACACTCTTCAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACG 196631
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
|||||||| ||||| || || || |||| ||||| || |||| || || || || |||
Sbjct 196630 ATGAAGGATGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCC 196571
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740
|||| || || || || ||| | |||||||| | || || || | | |||||
Sbjct 196570 AAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG-CTCCTACAT 196512
Query 363741 TCGCGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799
||||| ||| || |||||||| || | || |||||||| ||||| | |||| |
Sbjct 196511 -CGCGGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACA 196453
Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859
| ||| | ||||||||||| ||||| ||||| || || || || || || ||||
Sbjct 196452 CCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCG 196393
Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919
|||| || || || | || ||||| || || || || || ||| || || ||||
Sbjct 196392 AGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGG 196333
Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979
|| | || || |||||||| |||| ||| || ||| || | || | |||||| |||| |
Sbjct 196332 AAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTG 196273
Query 363980 TGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039
| ||||| | | ||| | ||||| ||||| ||| || || || ||| |
Sbjct 196272 TCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAG 196213
Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099
| | || || || | || | | |||||| || ||| |||||| || |
Sbjct 196212 TCTATGGCGAAGAGTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGA 196153
Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159
|||| || ||||| || || || |||| || || | || | ||| | || || || |
Sbjct 196152 AGACGATCCCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCA 196093
Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219
|||| ||| | |||||||| | ||| || || ||||| || ||||||| |
Sbjct 196092 ACCCCTTCATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGGCA 196033
Query 364220 CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
| || || | ||||| || |||||||| || || ||| | || || |||||| |
Sbjct 196032 CGATCAAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCG 195973
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311
|||| || ||| | || ||||||||| | |||
Sbjct 195972 CCGTCTGCAACTTGGCCTCGATCGCGTTGCCG 195941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351145214954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |