Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq62 244 3e-59 >seq62 Length=232403 Score = 244 bits (270), Expect = 3e-59 Identities = 583/872 (67%), Gaps = 16/872 (2%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 |||||||||||||| ||| | |||||||| || |||| |||||| | | || | || Sbjct 196804 GAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGACATCGAG 196745 Query 363508 GCCGCGA-TTGAAA-CATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACG 363561 |||| ||| || | || || || ||| || ||| | |||| |||||| || Sbjct 196744 --CGCGTCTTGCAATCGTACAACCTCATGTCTGAGCGCTACT----TCACCCACGCCTCG 196691 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 || ||| | | |||||| ||||| | | | || ||| | || || || || || | | Sbjct 196690 CCGACACTCTTCAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACG 196631 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| ||||| || || || |||| ||||| || |||| || || || || ||| Sbjct 196630 ATGAAGGATGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCC 196571 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 |||| || || || || ||| | |||||||| | || || || | | ||||| Sbjct 196570 AAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG-CTCCTACAT 196512 Query 363741 TCGCGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 ||||| ||| || |||||||| || | || |||||||| ||||| | |||| | Sbjct 196511 -CGCGGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACA 196453 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 | ||| | ||||||||||| ||||| ||||| || || || || || || |||| Sbjct 196452 CCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCG 196393 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919 |||| || || || | || ||||| || || || || || ||| || || |||| Sbjct 196392 AGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGG 196333 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979 || | || || |||||||| |||| ||| || ||| || | || | |||||| |||| | Sbjct 196332 AAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTG 196273 Query 363980 TGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 | ||||| | | ||| | ||||| ||||| ||| || || || ||| | Sbjct 196272 TCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAG 196213 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 | | || || || | || | | |||||| || ||| |||||| || | Sbjct 196212 TCTATGGCGAAGAGTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGA 196153 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 |||| || ||||| || || || |||| || || | || | ||| | || || || | Sbjct 196152 AGACGATCCCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCA 196093 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 |||| ||| | |||||||| | ||| || || ||||| || ||||||| | Sbjct 196092 ACCCCTTCATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGGCA 196033 Query 364220 CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 | || || | ||||| || |||||||| || || ||| | || || |||||| | Sbjct 196032 CGATCAAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCG 195973 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 |||| || ||| | || ||||||||| | ||| Sbjct 195972 CCGTCTGCAACTTGGCCTCGATCGCGTTGCCG 195941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351145214954