Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq73 138 1e-27 seq65 127 2e-24 seq109 122 8e-23 seq60 91.5 1e-13 >seq73 Length=1824528 Score = 138 bits (152), Expect = 1e-27 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||||||||||||||| |||||||||||| Sbjct 212644 CCACCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCG 212703 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||| |||||||| || ||| Sbjct 212704 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 212763 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 212764 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 212823 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 |||| ||| | ||| || || || || || || || || || |||| Sbjct 212824 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 212869 >seq65 Length=1908199 Score = 127 bits (140), Expect = 2e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| || | || || || || || | ||||||||||||||| ||||||||| Sbjct 1743311 ATGATGCCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAA 1743370 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 ||| | ||||| ||||| ||||||||||| || |||| | ||| |||||||| Sbjct 1743371 TCGGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCT 1743430 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| ||||| ||||| ||| || ||||| | || | || |||| ||| Sbjct 1743431 GGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGAC 1743490 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| |||| ||| | || || || || ||||| || || || || ||| ||| Sbjct 1743491 TCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGA 1743545 >seq109 Length=1431625 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| ||| || || | ||||||||||| || |||||||||||| Sbjct 870389 CCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 870330 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| || ||||| ||||| || || Sbjct 870329 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 870270 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | || || | ||||||| Sbjct 870269 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 870210 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || ||||| |||||||| Sbjct 870209 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 870163 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| || |||||||||||| Sbjct 625310 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625251 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| || || || ||||| || || Sbjct 625250 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGTTGGTCTGGGGGA 625191 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | || || | |||||||| Sbjct 625190 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 625131 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || |||||||| ||||| Sbjct 625130 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 625084 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||| ||| || || | ||||||||||| || |||||||||||| Sbjct 870617 CCCCCACGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 870558 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| || ||||| ||||| || || Sbjct 870557 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 870498 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | || || | ||||||| Sbjct 870497 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 870438 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || ||||| |||||||| Sbjct 870437 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 870391 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||||||| || || | ||||||||||| || |||||||||||| Sbjct 870845 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 870786 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| || ||||| ||||| || || Sbjct 870785 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 870726 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | || || | ||||||| Sbjct 870725 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 870666 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || ||||| || ||||| Sbjct 870665 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 870619 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| || |||||||||||| Sbjct 625538 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625479 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| ||||| || |||| | || || ||||| || || Sbjct 625478 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGA 625419 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | || || | |||||||| Sbjct 625418 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 625359 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| || ||||| Sbjct 625358 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625312 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| || |||||||||||| Sbjct 625766 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625707 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| ||||| || |||| | || || ||||| || || Sbjct 625706 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGA 625647 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | || || | |||||||| Sbjct 625646 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 625587 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| || ||||| Sbjct 625586 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625540 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||||||||||| || |||||||| ||| Sbjct 625994 CCGCCTCGGAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 625935 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | || || ||||| || || Sbjct 625934 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGA 625875 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 625874 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 625815 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| || ||||| Sbjct 625814 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768 >seq60 Length=1146088 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 46234 GGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCAT 46293 ||| | |||||||| |||| ||| ||||||||| || ||||| ||||||||||| || Sbjct 224397 GGCTTGATGCCCGGATTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCAC 224456 Query 46294 ACGGACTTTGCGTGTCTC-TACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACAC 46352 || |||||||| || ||| | | | ||| | || | ||| | || | |||||||| Sbjct 224457 ACCGACTTTGCTTGCCTCTTGTTCTCCCAC-CTCGAG--CGAAGACCTCAC-CCCGACAC 224512 Query 46353 CGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACT 46412 ||| | ||| |||||||||| || | ||||||||||| || || || | || || Sbjct 224513 CGTCGCGCTCATCATCAAGGAGGCCGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCT 224572 Query 46413 GCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGC 46452 ||| | || | |||||||| || || |||||| Sbjct 224573 TCCCTGCGGTTTGATCGGCATGAATGCCAAGCTCATGTGC 224612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011932676480