Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq109 84.2 2e-11 >seq109 Length=1431625 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || |||| || ||||| |||||||| || |||||||||||||| Sbjct 625994 CCGCCTCGGAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 625935 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | || ||||| ||| | || || || |||||||| || Sbjct 625934 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGA 625875 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 625874 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCGATCGTGTCCGAAGACTCGA 625817 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| || || |||||||| || ||||| || || ||||| Sbjct 625816 CCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/231 (69%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 16706 TACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCG 16765 ||||| || || || | || |||| || ||||| |||||||| || |||||||| ||| Sbjct 870619 TACCC-CCACGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCG 870561 Query 16766 GCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACA 16825 || | || | | ||||| | || ||||| ||| | || | ||||||||||| Sbjct 870560 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGG 870501 Query 16826 GGCACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 || | ||| || ||||| ||| ||| | ||| || | | | | ||||| | ||| Sbjct 870500 GGAATGCCTTCCTTGTCTTGAATCTTGGT-CTTGACGTTGTCAATCGTGTCCGACGACTC 870442 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || || ||||| ||||| || |||||||| Sbjct 870441 GACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 870391 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/234 (69%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 16703 ATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAG 16762 ||| |||| || || || | ||| |||| || ||||| |||||||| || |||||||| Sbjct 870850 ATTGACCC-CCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAA 870792 Query 16763 TCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 ||||| | || | | ||||| | || ||||| ||| | || | ||||||||||| Sbjct 870791 TCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCT 870732 Query 16823 ACAGGCACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGG 16881 || | ||| || ||||| ||| ||| | ||| || | | | | ||||| | Sbjct 870731 GGGGGAATGCCTTCCTTGTCTTGAATCTTGGT-CTTGACGTTGTCAATCGTGTCCGACGA 870673 Query 16882 CTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || | |||||| || || || || ||||| ||||| || || ||||| Sbjct 870672 CTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 870619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087274259530