Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq128 140 2e-28
seq79 140 2e-28
seq71 140 2e-28
seq40 140 2e-28
seq39 140 2e-28
seq99 118 7e-22
>seq128
Length=305336
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 298318 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 298259
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 298258 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 298224
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 295922 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 295863
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 295862 GCCAATATTTAGCTTTA 295846
>seq79
Length=30831
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 8667 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 8608
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 8607 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 8573
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 18640 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 18581
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 18580 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 18546
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 28613 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 28554
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 28553 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 28519
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 6271 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 6212
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 6211 GCCAATATTTAGCTTTA 6195
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 16244 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 16185
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 16184 GCCAATATTTAGCTTTA 16168
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 26217 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 26158
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 26157 GCCAATATTTAGCTTTA 26141
>seq71
Length=22528
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 4008 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3949
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 3948 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3914
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 13976 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 13917
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 13916 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 13882
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 1612 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 1553
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 1552 GCCAATATTTAGCTTTA 1536
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 11580 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 11521
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 11520 GCCAATATTTAGCTTTA 11504
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 21547 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 21488
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 21487 GCCAATATTTAGCTTTA 21471
>seq40
Length=35106
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 8005 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 7946
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 7945 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 7911
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 17975 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 17916
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 17915 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 17881
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 27947 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 27888
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 27887 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 27853
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 5609 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 5550
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 5549 GCCAATATTTAGCTTTA 5533
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 15579 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 15520
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 15519 GCCAATATTTAGCTTTA 15503
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 25551 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 25492
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 25491 GCCAATATTTAGCTTTA 25475
>seq39
Length=26446
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3334 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3275
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 3274 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3240
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 13301 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 13242
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 13241 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 13207
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 23266 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 23207
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 23206 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 23172
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 10905 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 10846
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 10845 GCCAATATTTAGCTTTA 10829
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 20870 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 20811
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 20810 GCCAATATTTAGCTTTA 20794
Score = 95.1 bits (104), Expect = 8e-15
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||| ||||||||||||||||||||||||||| |
Sbjct 942 CTCTCTTTCCAAAGTGCTTTTCATCTTTCC-TCACGGTACTTGTTCGCTATCGGTCTCTC 884
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 883 GCCAATATTTAGCTTTA 867
>seq99
Length=438116
Score = 118 bits (130), Expect = 7e-22
Identities = 276/406 (68%), Gaps = 9/406 (2%)
Strand=Plus/Plus
Query 6200 GTTCTACCGCTACAAAATG-CCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||||||||||||| ||| || ||| ||| ||||| |||||||| || ||||| |
Sbjct 79171 GTTCTACCGCTACAAGATGCCCTCGC-TCTTGACCAAGATCGAGGGTCGCGGCAACGGCA 79229
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGA-CGCCCTGCCACC 6317
|||| || || || ||||||| |||| ||||| || || | | ||||| | |
Sbjct 79230 TTAAGACTGTGTTTCCCAACATGGCTGATGTCGCGCGAGC-CTTGAATCGCCCGTCGTCG 79288
Query 6318 TACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAAC 6377
|||||||| || | || ||||||||||| ||||| ||| || || | | | | |
Sbjct 79289 TACCCGACCAAGTTCTTTGGGTGCGAACTCGGCGCCCAGGCGACCTTCAACGATGAGACC 79348
Query 6378 GAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGC 6437
|| |||| |||||| || || |||| | | |||| ||||| || |||| |
Sbjct 79349 GAACGCTACATCGTCAATGGCGCGCACGAGACGAATCGTCTGCGTGACTTGCTCGACGTC 79408
Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTG 6497
|| || |||||| |||||||| | ||| | || || || || ||||| ||
Sbjct 79409 TTCATCGACAAGTTCGTGCTGTGCGCGTCGTGCAAGAATCCCGAAACGGAGCTCAT--CA 79466
Query 6498 TCTACCAAGAGAAACACCATCTCTCAG-GGCTGCAAAGCGTGCGGTTACCATGGCAAGCT 6556
|| | |||| || |||| ||| | | |||||| || ||||| | | ||||| |
Sbjct 79467 TCACCAAAGACGAA-TTCATC-CTCCGTGACTGCAAGGCCTGCGGCAAGCGCGGCAACGT 79524
Query 6557 GGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCCA 6602
|| | |||||||||| |||||||| || ||||| ||||||
Sbjct 79525 CGACATGCGCCACAAACTCACGACCTTCATCCTTAAGAACCCTCCA 79570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946599921157
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |