Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq128 140 2e-28 seq79 140 2e-28 seq71 140 2e-28 seq40 140 2e-28 seq39 140 2e-28 seq99 118 7e-22 >seq128 Length=305336 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 298318 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 298259 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 298258 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 298224 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 295922 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 295863 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 295862 GCCAATATTTAGCTTTA 295846 >seq79 Length=30831 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 8667 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 8608 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 8607 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 8573 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 18640 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 18581 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 18580 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 18546 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 28613 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 28554 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 28553 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 28519 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 6271 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 6212 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 6211 GCCAATATTTAGCTTTA 6195 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 16244 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 16185 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 16184 GCCAATATTTAGCTTTA 16168 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 26217 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 26158 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 26157 GCCAATATTTAGCTTTA 26141 >seq71 Length=22528 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4008 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3949 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3948 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3914 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 13976 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 13917 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 13916 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 13882 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1612 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 1553 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 1552 GCCAATATTTAGCTTTA 1536 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 11580 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 11521 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 11520 GCCAATATTTAGCTTTA 11504 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 21547 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 21488 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 21487 GCCAATATTTAGCTTTA 21471 >seq40 Length=35106 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 8005 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 7946 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 7945 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 7911 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 17975 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 17916 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 17915 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 17881 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 27947 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 27888 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 27887 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 27853 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 5609 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 5550 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 5549 GCCAATATTTAGCTTTA 5533 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 15579 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 15520 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 15519 GCCAATATTTAGCTTTA 15503 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 25551 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 25492 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 25491 GCCAATATTTAGCTTTA 25475 >seq39 Length=26446 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3334 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3275 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3274 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3240 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 13301 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 13242 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 13241 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 13207 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 23266 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 23207 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 23206 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 23172 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 10905 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 10846 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 10845 GCCAATATTTAGCTTTA 10829 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 20870 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 20811 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 20810 GCCAATATTTAGCTTTA 20794 Score = 95.1 bits (104), Expect = 8e-15 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||| ||||||||||||||||||||||||||| | Sbjct 942 CTCTCTTTCCAAAGTGCTTTTCATCTTTCC-TCACGGTACTTGTTCGCTATCGGTCTCTC 884 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 883 GCCAATATTTAGCTTTA 867 >seq99 Length=438116 Score = 118 bits (130), Expect = 7e-22 Identities = 276/406 (68%), Gaps = 9/406 (2%) Strand=Plus/Plus Query 6200 GTTCTACCGCTACAAAATG-CCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||||||||||||| ||| || ||| ||| ||||| |||||||| || ||||| | Sbjct 79171 GTTCTACCGCTACAAGATGCCCTCGC-TCTTGACCAAGATCGAGGGTCGCGGCAACGGCA 79229 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGA-CGCCCTGCCACC 6317 |||| || || || ||||||| |||| ||||| || || | | ||||| | | Sbjct 79230 TTAAGACTGTGTTTCCCAACATGGCTGATGTCGCGCGAGC-CTTGAATCGCCCGTCGTCG 79288 Query 6318 TACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAAC 6377 |||||||| || | || ||||||||||| ||||| ||| || || | | | | | Sbjct 79289 TACCCGACCAAGTTCTTTGGGTGCGAACTCGGCGCCCAGGCGACCTTCAACGATGAGACC 79348 Query 6378 GAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGC 6437 || |||| |||||| || || |||| | | |||| ||||| || |||| | Sbjct 79349 GAACGCTACATCGTCAATGGCGCGCACGAGACGAATCGTCTGCGTGACTTGCTCGACGTC 79408 Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTG 6497 || || |||||| |||||||| | ||| | || || || || ||||| || Sbjct 79409 TTCATCGACAAGTTCGTGCTGTGCGCGTCGTGCAAGAATCCCGAAACGGAGCTCAT--CA 79466 Query 6498 TCTACCAAGAGAAACACCATCTCTCAG-GGCTGCAAAGCGTGCGGTTACCATGGCAAGCT 6556 || | |||| || |||| ||| | | |||||| || ||||| | | ||||| | Sbjct 79467 TCACCAAAGACGAA-TTCATC-CTCCGTGACTGCAAGGCCTGCGGCAAGCGCGGCAACGT 79524 Query 6557 GGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCCA 6602 || | |||||||||| |||||||| || ||||| |||||| Sbjct 79525 CGACATGCGCCACAAACTCACGACCTTCATCCTTAAGAACCCTCCA 79570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946599921157