Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq60 93.3 4e-14 >seq60 Length=1146088 Score = 93.3 bits (102), Expect = 4e-14 Identities = 168/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 20411 GCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCC 20470 ||||||||||| |||| || ||||| ||||||||| ||||| | || || | Sbjct 347545 GCCGGGTTCCAAGCACTCAAGATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTG 347604 Query 20471 ACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGC-GTCCACGTA 20529 |||| | | ||| || || | ||| | || ||| ||| | | || |||| || Sbjct 347605 ACAACCTGCATCAACTGATCGACCCCTTCCCCCTGATAATCATCCTTGGCCGTCCTA-TA 347663 Query 20530 CGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT 20589 | | || || || |||||||||||||| || ||||| ||||||||||||||||| || Sbjct 347664 CTCTGCGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCT 347723 Query 20590 GTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC 20649 ||| ||| || | | |||| |||| || || ||||| ||||| |||||||| Sbjct 347724 ATGCCCCAACCCAACCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAATCTTGAC 347783 Query 20650 TCC 20652 || Sbjct 347784 CCC 347786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441371988977480