Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq109 141 2e-28
seq65 113 1e-19
seq73 95.1 3e-14
>seq109
Length=1431625
Score = 141 bits (156), Expect = 2e-28
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || ||||| || || ||||||
Sbjct 625538 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625479
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| || || || | ||||| || || |||||||| || ||||| ||||||
Sbjct 625478 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGG---TCTGGG 625422
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || ||||||||||| || || || ||||| || || | || || ||
Sbjct 625421 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 625362
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 625361 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625312
Score = 141 bits (156), Expect = 2e-28
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || ||||| || || ||||||
Sbjct 625766 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625707
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| || || || | ||||| || || |||||||| || ||||| ||||||
Sbjct 625706 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGG---TCTGGG 625650
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || ||||||||||| || || || ||||| || || | || || ||
Sbjct 625649 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 625590
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 625589 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625540
Score = 141 bits (156), Expect = 2e-28
Identities = 172/233 (74%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || ||||| | || || | |||| ||| || || ||||| || ||||||
Sbjct 625997 TGTCCGCCTCGGAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 625938
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||||||||||| || || || | || || || || |||||||| || ||||| |||
Sbjct 625937 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGG---TCT 625881
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || |||||||| || || || ||||| || || | || ||
Sbjct 625880 GGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGAC 625821
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 625820 TCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || ||||| || || ||||||
Sbjct 625310 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625251
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| || || || | || || || |||||||||| || ||||| ||||||
Sbjct 625250 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGTTGG---TCTGGG 625194
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || ||||||||||| || || || ||||| || || | || || ||
Sbjct 625193 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 625134
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 625133 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 625084
Score = 116 bits (128), Expect = 9e-21
Identities = 143/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || |||||||||||||| || || || | || || || || |||
Sbjct 870581 TCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 870522
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||||| |||||| || ||||| || || || || || | || |||
Sbjct 870521 ATCAATCGCTGTTGG---TCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACG 870465
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || ||| || || ||||| ||||||||||| || || || ||||||
Sbjct 870464 TTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTG 870405
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 870404 ACGAAGATCTGCAT 870391
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | | || | || | ||| || || ||||| || || ||||||
Sbjct 870389 CCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 870330
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| || || || | || || || || ||||||| |||||||| ||||||
Sbjct 870329 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGG---TCTGGG 870273
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || || || || | || ||||| || || | || ||| ||
Sbjct 870272 GGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCG 870213
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||||||||| || || || ||||| ||||| ||||||||
Sbjct 870212 ACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 870163
Score = 113 bits (124), Expect = 1e-19
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || |||||||||||||| || || || | || || || || |||
Sbjct 870809 TCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 870750
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||||| |||||| || ||||| || || || || || | || |||
Sbjct 870749 ATCAATCGCTGTTGG---TCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACG 870693
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || ||| || || ||||| ||||||||||| || || || ||||||
Sbjct 870692 TTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTG 870633
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 870632 ACGAAGATTTGCAT 870619
>seq65
Length=1908199
Score = 113 bits (124), Expect = 1e-19
Identities = 141/192 (73%), Gaps = 6/192 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || || |||||||| ||||| || || || | || || || || |||
Sbjct 1743353 TCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 1743412
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||| || || ||||| ||| ||||| || || ||||| || | || |||
Sbjct 1743413 ATGAGACGTTGCTGG---TCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACG 1743469
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| ||| || || ||||| ||||||||||| || || |||||||||
Sbjct 1743470 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTG 1743529
Query 288460 ACGAATATCTGC 288471
|| || || |||
Sbjct 1743530 ACAAAGATTTGC 1743541
>seq73
Length=1824528
Score = 95.1 bits (104), Expect = 3e-14
Identities = 711/1115 (64%), Gaps = 64/1115 (6%)
Strand=Plus/Plus
Query 325343 TCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGG--CAACAACCAGTTGATGT 325400
|| |||||||| |||| | || ||| || || || | ||| | | || ||||| ||
Sbjct 1165632 TCTTTACCACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCGAGAAT--GTTGAGGT 1165689
Query 325401 TATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGC 325460
| ||| ||||| | | || || ||| | |||||| ||||||| | ||| |
Sbjct 1165690 TGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCAC 1165749
Query 325461 CATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGG 325520
| || || || || ||||| || |||||||||| || ||| | ||||| | ||
Sbjct 1165750 CGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCT 1165809
Query 325521 TCGTCAAATTGCGCTTGAA--AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACC 325578
|||||| ||||||||||| | | || | | || || |||||| |||||||| ||
Sbjct 1165810 GCGTCAACTTGCGCTTGAAGCAACCGA--ACAAGACCTTGCGTTGACCCGGTTTGAACCC 1165867
Query 325579 ATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTT 325638
||||| ||| || ||||| || | ||| | |||||| | || | |||||
Sbjct 1165868 ATCAATGACAGAGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTT 1165927
Query 325639 GTCGATGAAGT-CGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGATTTCCTGGTT 325697
|| |||||| | | || |||| || |||| | ||||||| || | | || ||
Sbjct 1165928 GTTGATGAAATCCTCGATCGGG-ACTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGA 1165986
Query 325698 CGTATGCCGTC--ATCCACTCCTTGCGATCCTCGGC--TCGTGACTTGTTGAA----AGA 325749
|| | ||| || | ||| |||||||| | ||||| || | ||||||||| |
Sbjct 1165987 CG-AAGCC-TCGGAGCCATTCCTTGCGGTTGTCGGCCTTCTT--CTTGTTGAAGGCCATG 1166042
Query 325750 ACGGTCAAT--GAGCTC-TCCGGAATCGGAAGTCCACATAAACGTCTTCATGAGAGACTT 325806
|| ||||| | |||| ||| | ||| | | | |||| || | || |||
Sbjct 1166043 TCGATCAATTCGCGCTCTTCCTGCGTCGAAGGGC----GGAACG---GCAAGCGATGCTT 1166095
Query 325807 ---CAGATTGCTGAAGTATTTTTTGGCATCTGCACTGG---AACTCGTACCAAGCCCCTT 325860
|| |||| ||||| || || | | |||| ||||||||| | |||||
Sbjct 1166096 GTCCATGTTGCCAAAGTACTTAACCGCGT---CCCTGGCGTCACTCGTACCCAATCCCTT 1166152
Query 325861 AAAATACTTG----GTCGTCCATTTCTTCAT-ATCTTGTGTCTT-CACGAAGTCTTCGAA 325914
|| |||||| | | |||| | ||| ||| || |||| | | | ||| |
Sbjct 1166153 GAAGTACTTGATGCGCCATCCACGAC--CATCATC-GGTCTCTTCCTTCCATTGCTCGTA 1166209
Query 325915 GTCAGGAAGACTGAAAAATTCTCTGACTTCT--TTTCCCTTCCTGGCAACTACGATAGGC 325972
| ||||| |||||||| ||| || || ||||| | || ||||| ||
Sbjct 1166210 CTGAGGAATTGTGAAAAAT--GACAACTCCTTGTTCCCCTTGGTCGCCTTGACGATGGGG 1166267
Query 325973 GTGATGAACTTCTTCAAGAA-CCCTGGAATTTCTAGAAGATTAGGGAAACAGCTATGGAA 326031
||||| |||| |||||| |||| | || || | |||||| ||| || ||
Sbjct 1166268 GTGATAAACTCGAGCAAGAAGCCCTTCAGCTT-GAGCAACGAAGGGAACCAGTAATCGAG 1166326
Query 326032 AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCAT 326091
||||| |||| ||||| ||||| | ||| || ||| |||| |||||||||
Sbjct 1166327 GAAGTTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCAT 1166386
Query 326092 CACATGACCGTAACGAAGCGAG--GACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCG 326149
| | |||||||| |||||| ||| ||| |||| ||||| || || || ||
Sbjct 1166387 GAGCTTGCCGTAACGGAGCGAGTCGAC--GTCGGTGTAAACTTTGCCCTGCTGCAGACCC 1166444
Query 326150 AGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA-TGCTTGCCACGGATGCATC 326208
| || || |||| |||| || || | || | || |||| | | | || ||
Sbjct 1166445 AAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGC-CCGCCGCTTC 1166503
Query 326209 GCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCGACCAC 326268
|| ||||| | | ||||| || | |||||| || ||||| | || |||||||| ||
Sbjct 1166504 ACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGAC 1166563
Query 326269 GGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 326328
| ||| || | || || || | | |||||||| || || |||| ||||| |||||
Sbjct 1166564 AGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCA 1166623
Query 326329 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGAATTCCAGTCAC 326388
| | | ||| |||| ||||| | ||||| | ||| ||| | || || |
Sbjct 1166624 CTTGGACCCGTTCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTGACGAGACCCGTGAT 1166683
Query 326389 TCG-GATCTTCTTGGTACCGTCGGTCTTCTTCAGC 326422
|| |||| |||| ||||| |||||||| |||
Sbjct 1166684 ACGCGATC-GCTTGTGTCCGTCCGTCTTCTTGAGC 1166717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179652178194666
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