Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq109 141 2e-28 seq65 113 1e-19 seq73 95.1 3e-14 >seq109 Length=1431625 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||| || || ||||| || || |||||| Sbjct 625538 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625479 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | ||||| || || |||||||| || ||||| |||||| Sbjct 625478 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGG---TCTGGG 625422 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| || || || ||||| || || | || || || Sbjct 625421 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 625362 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct 625361 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625312 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||| || || ||||| || || |||||| Sbjct 625766 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625707 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | ||||| || || |||||||| || ||||| |||||| Sbjct 625706 AGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGG---TCTGGG 625650 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| || || || ||||| || || | || || || Sbjct 625649 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 625590 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct 625589 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625540 Score = 141 bits (156), Expect = 2e-28 Identities = 172/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || ||||| | || || | |||| ||| || || ||||| || |||||| Sbjct 625997 TGTCCGCCTCGGAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 625938 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||||||||||| || || || | || || || || |||||||| || ||||| ||| Sbjct 625937 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGG---TCT 625881 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || |||||||| || || || ||||| || || | || || Sbjct 625880 GGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGAC 625821 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct 625820 TCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||| || || ||||| || || |||||| Sbjct 625310 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 625251 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || |||||||||| || ||||| |||||| Sbjct 625250 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGTTGG---TCTGGG 625194 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| || || || ||||| || || | || || || Sbjct 625193 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 625134 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct 625133 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 625084 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||||||||||||| || || || | || || || || ||| Sbjct 870581 TCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 870522 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||||| |||||| || ||||| || || || || || | || ||| Sbjct 870521 ATCAATCGCTGTTGG---TCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACG 870465 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||| || || ||||| ||||||||||| || || || |||||| Sbjct 870464 TTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTG 870405 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 870404 ACGAAGATCTGCAT 870391 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | | || | || | ||| || || ||||| || || |||||| Sbjct 870389 CCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 870330 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || || ||||||| |||||||| |||||| Sbjct 870329 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGG---TCTGGG 870273 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || || || || || | || ||||| || || | || ||| || Sbjct 870272 GGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCG 870213 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || || || ||||| ||||| |||||||| Sbjct 870212 ACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 870163 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||||||||||||| || || || | || || || || ||| Sbjct 870809 TCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 870750 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||||| |||||| || ||||| || || || || || | || ||| Sbjct 870749 ATCAATCGCTGTTGG---TCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACG 870693 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||| || || ||||| ||||||||||| || || || |||||| Sbjct 870692 TTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTG 870633 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 870632 ACGAAGATTTGCAT 870619 >seq65 Length=1908199 Score = 113 bits (124), Expect = 1e-19 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || |||||||| ||||| || || || | || || || || ||| Sbjct 1743353 TCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 1743412 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||| || || ||||| ||| ||||| || || ||||| || | || ||| Sbjct 1743413 ATGAGACGTTGCTGG---TCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACG 1743469 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || || ||||| ||||||||||| || || ||||||||| Sbjct 1743470 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTG 1743529 Query 288460 ACGAATATCTGC 288471 || || || ||| Sbjct 1743530 ACAAAGATTTGC 1743541 >seq73 Length=1824528 Score = 95.1 bits (104), Expect = 3e-14 Identities = 711/1115 (64%), Gaps = 64/1115 (6%) Strand=Plus/Plus Query 325343 TCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGG--CAACAACCAGTTGATGT 325400 || |||||||| |||| | || ||| || || || | ||| | | || ||||| || Sbjct 1165632 TCTTTACCACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCGAGAAT--GTTGAGGT 1165689 Query 325401 TATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGC 325460 | ||| ||||| | | || || ||| | |||||| ||||||| | ||| | Sbjct 1165690 TGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCAC 1165749 Query 325461 CATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGG 325520 | || || || || ||||| || |||||||||| || ||| | ||||| | || Sbjct 1165750 CGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCT 1165809 Query 325521 TCGTCAAATTGCGCTTGAA--AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACC 325578 |||||| ||||||||||| | | || | | || || |||||| |||||||| || Sbjct 1165810 GCGTCAACTTGCGCTTGAAGCAACCGA--ACAAGACCTTGCGTTGACCCGGTTTGAACCC 1165867 Query 325579 ATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTT 325638 ||||| ||| || ||||| || | ||| | |||||| | || | ||||| Sbjct 1165868 ATCAATGACAGAGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTT 1165927 Query 325639 GTCGATGAAGT-CGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGATTTCCTGGTT 325697 || |||||| | | || |||| || |||| | ||||||| || | | || || Sbjct 1165928 GTTGATGAAATCCTCGATCGGG-ACTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGA 1165986 Query 325698 CGTATGCCGTC--ATCCACTCCTTGCGATCCTCGGC--TCGTGACTTGTTGAA----AGA 325749 || | ||| || | ||| |||||||| | ||||| || | ||||||||| | Sbjct 1165987 CG-AAGCC-TCGGAGCCATTCCTTGCGGTTGTCGGCCTTCTT--CTTGTTGAAGGCCATG 1166042 Query 325750 ACGGTCAAT--GAGCTC-TCCGGAATCGGAAGTCCACATAAACGTCTTCATGAGAGACTT 325806 || ||||| | |||| ||| | ||| | | | |||| || | || ||| Sbjct 1166043 TCGATCAATTCGCGCTCTTCCTGCGTCGAAGGGC----GGAACG---GCAAGCGATGCTT 1166095 Query 325807 ---CAGATTGCTGAAGTATTTTTTGGCATCTGCACTGG---AACTCGTACCAAGCCCCTT 325860 || |||| ||||| || || | | |||| ||||||||| | ||||| Sbjct 1166096 GTCCATGTTGCCAAAGTACTTAACCGCGT---CCCTGGCGTCACTCGTACCCAATCCCTT 1166152 Query 325861 AAAATACTTG----GTCGTCCATTTCTTCAT-ATCTTGTGTCTT-CACGAAGTCTTCGAA 325914 || |||||| | | |||| | ||| ||| || |||| | | | ||| | Sbjct 1166153 GAAGTACTTGATGCGCCATCCACGAC--CATCATC-GGTCTCTTCCTTCCATTGCTCGTA 1166209 Query 325915 GTCAGGAAGACTGAAAAATTCTCTGACTTCT--TTTCCCTTCCTGGCAACTACGATAGGC 325972 | ||||| |||||||| ||| || || ||||| | || ||||| || Sbjct 1166210 CTGAGGAATTGTGAAAAAT--GACAACTCCTTGTTCCCCTTGGTCGCCTTGACGATGGGG 1166267 Query 325973 GTGATGAACTTCTTCAAGAA-CCCTGGAATTTCTAGAAGATTAGGGAAACAGCTATGGAA 326031 ||||| |||| |||||| |||| | || || | |||||| ||| || || Sbjct 1166268 GTGATAAACTCGAGCAAGAAGCCCTTCAGCTT-GAGCAACGAAGGGAACCAGTAATCGAG 1166326 Query 326032 AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCAT 326091 ||||| |||| ||||| ||||| | ||| || ||| |||| ||||||||| Sbjct 1166327 GAAGTTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCAT 1166386 Query 326092 CACATGACCGTAACGAAGCGAG--GACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCG 326149 | | |||||||| |||||| ||| ||| |||| ||||| || || || || Sbjct 1166387 GAGCTTGCCGTAACGGAGCGAGTCGAC--GTCGGTGTAAACTTTGCCCTGCTGCAGACCC 1166444 Query 326150 AGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA-TGCTTGCCACGGATGCATC 326208 | || || |||| |||| || || | || | || |||| | | | || || Sbjct 1166445 AAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGC-CCGCCGCTTC 1166503 Query 326209 GCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCGACCAC 326268 || ||||| | | ||||| || | |||||| || ||||| | || |||||||| || Sbjct 1166504 ACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGAC 1166563 Query 326269 GGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 326328 | ||| || | || || || | | |||||||| || || |||| ||||| ||||| Sbjct 1166564 AGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCA 1166623 Query 326329 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGAATTCCAGTCAC 326388 | | | ||| |||| ||||| | ||||| | ||| ||| | || || | Sbjct 1166624 CTTGGACCCGTTCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTGACGAGACCCGTGAT 1166683 Query 326389 TCG-GATCTTCTTGGTACCGTCGGTCTTCTTCAGC 326422 || |||| |||| ||||| |||||||| ||| Sbjct 1166684 ACGCGATC-GCTTGTGTCCGTCCGTCTTCTTGAGC 1166717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652178194666