Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq73 89.7 1e-12
>seq73
Length=1824528
Score = 89.7 bits (98), Expect = 1e-12
Identities = 710/1115 (64%), Gaps = 64/1115 (6%)
Strand=Plus/Plus
Query 297464 TCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGG--CAACAACCAGTTGATGT 297521
|| |||||||| |||| | || ||| || || || | ||| | | || ||||| ||
Sbjct 1165632 TCTTTACCACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCGAGAAT--GTTGAGGT 1165689
Query 297522 TATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGC 297581
| ||| ||||| | | || || ||| | |||||| ||||||| | ||| |
Sbjct 1165690 TGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCAC 1165749
Query 297582 CATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGG 297641
| || || || || ||||| || |||||||||| || ||| | ||||| | ||
Sbjct 1165750 CGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCT 1165809
Query 297642 TCGTCAAATTGCGCTTGAA--AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACC 297699
|||||| ||||||||||| | | || | | || || |||||| |||||||| ||
Sbjct 1165810 GCGTCAACTTGCGCTTGAAGCAACCGA--ACAAGACCTTGCGTTGACCCGGTTTGAACCC 1165867
Query 297700 ATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTT 297759
||||| ||| || ||||| || | ||| | |||||| | || | |||||
Sbjct 1165868 ATCAATGACAGAGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTT 1165927
Query 297760 GTCGATGAAGT-CGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGATTTCCTGGTT 297818
|| |||||| | | || |||| || |||| | ||||||| || | | || ||
Sbjct 1165928 GTTGATGAAATCCTCGATCGGG-ACTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGA 1165986
Query 297819 CGTATGCCGTC--ATCCACTCCTTGCGATCCTCGGC--TCGTGACTTGTTGAA----AGA 297870
|| | ||| || | ||| |||||||| | ||||| || | ||||||||| |
Sbjct 1165987 CG-AAGCC-TCGGAGCCATTCCTTGCGGTTGTCGGCCTTCTT--CTTGTTGAAGGCCATG 1166042
Query 297871 ACGGTCAAT--GAGCTC-TCCGGAATCGGAAGTCCACATAAACGTCTTCATGAGAGACTT 297927
|| ||||| | |||| ||| | ||| | | | |||| || | || |||
Sbjct 1166043 TCGATCAATTCGCGCTCTTCCTGCGTCGAAGGGC----GGAACG---GCAAGCGATGCTT 1166095
Query 297928 ---CAGATTGCTGAAGTATTTTTTGGCATCTGCACTGG---AACTCGTACCAAGCCCCTT 297981
|| |||| ||||| || || | | |||| ||||||||| | |||||
Sbjct 1166096 GTCCATGTTGCCAAAGTACTTAACCGCGT---CCCTGGCGTCACTCGTACCCAATCCCTT 1166152
Query 297982 AAAATACTTG----GTCGTCCATTTCTTCAT-ATCTTGTGTCTT-CACGAAGTCTTCGAA 298035
|| |||||| | | |||| | ||| ||| || |||| | | | ||| |
Sbjct 1166153 GAAGTACTTGATGCGCCATCCACGAC--CATCATC-GGTCTCTTCCTTCCATTGCTCGTA 1166209
Query 298036 GTCAGGAAGACTGAAAAATTCTCTGACTTCT--TTTCCCTTCCTGGCAACTACGATAGGC 298093
| ||||| |||||||| ||| || || ||||| | || ||||| ||
Sbjct 1166210 CTGAGGAATTGTGAAAAAT--GACAACTCCTTGTTCCCCTTGGTCGCCTTGACGATGGGG 1166267
Query 298094 GTGATGAACTTCTTCAAGAA-CCCTGGAATTTCTAGAAGATTAGGGAAACAGCTATGGAA 298152
||||| |||| |||||| |||| | || || | |||||| ||| || ||
Sbjct 1166268 GTGATAAACTCGAGCAAGAAGCCCTTCAGCTT-GAGCAACGAAGGGAACCAGTAATCGAG 1166326
Query 298153 AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCAT 298212
||||| |||| ||||| ||||| | ||| || ||| |||| |||||||||
Sbjct 1166327 GAAGTTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCAT 1166386
Query 298213 CACATGACCGTAACGAAGCGAG--GACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCG 298270
| | |||||||| |||||| ||| ||| |||| ||||| || || || ||
Sbjct 1166387 GAGCTTGCCGTAACGGAGCGAGTCGAC--GTCGGTGTAAACTTTGCCCTGCTGCAGACCC 1166444
Query 298271 AGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA-TGCTTGCCACGGATGCATC 298329
| || || |||| |||| || || | || | || |||| | | | || ||
Sbjct 1166445 AAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGC-CCGCCGCTTC 1166503
Query 298330 GCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCGACCAC 298389
|| || || | | ||||| || | |||||| || ||||| | || |||||||| ||
Sbjct 1166504 ACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGAC 1166563
Query 298390 GGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 298449
| ||| || | || || || | | |||||||| || || |||| ||||| |||||
Sbjct 1166564 AGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCA 1166623
Query 298450 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGAATTCCAGTCAC 298509
| | | ||| |||| ||||| | ||||| | ||| ||| | || || |
Sbjct 1166624 CTTGGACCCGTTCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTGACGAGACCCGTGAT 1166683
Query 298510 TCG-GATCTTCTTGGTACCGTCGGTCTTCTTCAGC 298543
|| |||| |||| ||||| |||||||| |||
Sbjct 1166684 ACGCGATC-GCTTGTGTCCGTCCGTCTTCTTGAGC 1166717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102877922794450
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