Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq62 159 4e-34 seq73 120 4e-22 seq60 84.2 3e-11 >seq62 Length=232403 Score = 159 bits (176), Expect = 4e-34 Identities = 494/760 (65%), Gaps = 7/760 (1%) Strand=Plus/Plus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 195948 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 196007 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || |||| || || ||| || ||||| | ||||||||| || || ||| |||| Sbjct 196008 GTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCG 196067 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || || ||||| |||||| | || | || || || |||| | ||||| || | | Sbjct 196068 GCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 196127 Query 114650 CAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 114709 || | | || || | || ||||| || ||||||| ||||| ||| | | Sbjct 196128 CAAAGTTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTTTCGAAC 196187 Query 114710 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 114769 | ||| |||||||| || | | || ||| || || || | | | ||||||||| Sbjct 196188 AAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAG 196247 Query 114770 AGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCT 114829 || | ||| | || | |||| ||||||| ||| || || || || |||||||| || Sbjct 196248 AGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCA 196307 Query 114830 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 114889 |||||||||| ||| ||| |||| || | || || || || | |||| || Sbjct 196308 AAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAAC 196367 Query 114890 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 114946 || | || || |||||||| || || ||||| | ||||| | || ||| Sbjct 196368 TCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 196427 Query 114947 CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCA 115006 ||| | |||| || || | ||| ||| || | || || ||||| || | ||| || Sbjct 196428 CCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCG 196487 Query 115007 TCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGT 115064 | || | ||| || || ||| ||| || ||| | | || | || | |||||| Sbjct 196488 TTCGAGTAGCCGTTCGTGCCCGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATGC 196545 Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124 || ||| ||||| || || ||| ||||| |||||||| | |||| || |||||| Sbjct 196546 TCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGA 196605 Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTG 115184 | || || ||||| ||| |||| | | || ||||| || ||| | || || | Sbjct 196606 TGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAG 196665 Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 | || || || |||||||| || || | |||||| |||| Sbjct 196666 GCGTTCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAA 196705 >seq73 Length=1824528 Score = 120 bits (132), Expect = 4e-22 Identities = 293/433 (68%), Gaps = 17/433 (4%) Strand=Plus/Plus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581 ||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||| Sbjct 1166244 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 1166302 Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641 | || || | |||| | || | || | ||| |||||||| ||||| || ||||| Sbjct 1166303 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATC 1166362 Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701 || ||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 1166363 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 1166422 Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761 | || ||||| || ||||||||||||| ||||| | ||||| ||| || | ||| Sbjct 1166423 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 1166478 Query 172762 -GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACA 172817 ||| | || | | || || || || || |||| || || | |||||| | Sbjct 1166479 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 1166538 Query 172818 CACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 172877 |||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||||||| Sbjct 1166539 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 1166598 Query 172878 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 172935 | || || |||| ||||||||| ||||| || | | | ||| || || |||||||| Sbjct 1166599 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 1166656 Query 172936 ATCGTCCAACTTG 172948 ||| || | |||| Sbjct 1166657 ATCTTCGAGCTTG 1166669 >seq60 Length=1146088 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || || || || |||||||| ||| || || || || ||||||| ||| | Sbjct 407725 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 407784 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 407785 ACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 407844 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || | | | |||||| |||||| ||||||||||||||| Sbjct 407845 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 407904 Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744 || ||||| ||||||| ||||| || | |||||| Sbjct 407905 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 407943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352502362760