Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq62 250 2e-61 >seq62 Length=232403 Score = 250 bits (276), Expect = 2e-61 Identities = 735/1125 (65%), Gaps = 27/1125 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| ||||||||| || ||| || ||| | || || || |||| | Sbjct 196870 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 196811 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| | || || || || |||||| Sbjct 196810 GTAGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGAC 196751 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894 || | || |||| | | || |||| || | | || ||| ||| Sbjct 196750 ATCGAGCGCGTCTTGCAATCGTACAACCTCATGTCTGA---GCGCTACTTCACCCACGCC 196694 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || ||||| || || || || || ||| | || |||||||||||| | Sbjct 196693 TCGCCGACACTCTTCAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTC 196634 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| || || || || || | ||||| |||||| || ||| |||| Sbjct 196633 ACGATGAAGGATGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 196574 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 196573 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTAC 196514 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| || || || ||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 196513 ATCGCGGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAC 196454 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 196453 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 196394 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||| ||||| || Sbjct 196393 GAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAG 196334 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || || |||||| | || Sbjct 196333 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGT 196274 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| || || || ||| |||| ||||| || ||| Sbjct 196273 GTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAA 196214 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | ||| | ||| | | ||||| | |||||| | ||||| |||| Sbjct 196213 GTCTATGGCGAAGAGTTCCG-CGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAA 196155 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || || || ||| | ||| | || | ||||| || || || Sbjct 196154 GAAGACGATCCCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGG 196095 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | ||| ||| | | ||| || || ||||| || |||| || Sbjct 196094 CAACCCCTTCATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGG 196035 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||||||| ||||| |||||||||||||| ||||||| | | ||||||||| Sbjct 196034 CACGATCAAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTG 195975 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 || || || ||| ||| ||| ||| || | | ||| | | ||| || || Sbjct 195974 CGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGC 195921 Query 94673 CTACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731 ||| ||| | | | || | ||| | || || ||| | | || ||| Sbjct 195920 TTACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTCG---------TCGCTTTCAAC 195872 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 ||||| | | |||||| |||| ||| |||||| |||||| ||||||| ||| | Sbjct 195871 TTGAACCGCATCATCGACGTTAACTACTATCCCGTCATCGAGGCGCAGAACTCCAACTTC 195812 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| |||||| Sbjct 195811 CGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGCG 195767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722290946120