Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq109 123 2e-23 seq65 105 6e-18 seq73 98.7 9e-16 >seq109 Length=1431625 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | |||||||| || ||||| ||||| || |||||| Sbjct 625313 ATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 625254 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | || || || ||| | ||||||||||| ||||| || Sbjct 625253 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGTTGGTCTGGG 625194 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || ||||| || || || |||| || | || | ||||| || ||||| Sbjct 625193 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTC 625135 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| || | ||| |||||||| || || || || |||||||||||| Sbjct 625134 GACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCATC 625083 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | |||||| | || ||||| || ||||| ||||| || |||||| Sbjct 870392 ATACCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCG 870333 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | || || || || | |||||||| || ||||| || Sbjct 870332 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGG 870273 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || |||||||| || |||| || | || | ||||| || ||||| Sbjct 870272 GGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTC 870214 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| || | ||| ||||| || || || || || || || |||||| Sbjct 870213 GACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCATC 870162 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | |||||| | || ||||| || ||||| ||||| || |||||| Sbjct 870620 ATACCCCCACGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCG 870561 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | || || || || | |||||||| || ||||| || Sbjct 870560 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGG 870501 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || |||||||| || |||| || | || | ||||| || ||||| Sbjct 870500 GGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTC 870442 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | ||| ||||| || || || || || || || ||||| Sbjct 870441 GACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 870391 Score = 113 bits (124), Expect = 4e-20 Identities = 168/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 45109 TTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATA 45166 ||||| || || ||||| | || ||| | || ||||| || ||||| ||||| || || Sbjct 870852 TTATTGACCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTA 870793 Query 45167 ATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTC 45226 |||| || || ||| || | || || || || | |||||||| || ||||| Sbjct 870792 ATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTC 870733 Query 45227 CGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAG 45285 || ||||||||||| || |||||||| || |||| || | || | ||||| || | Sbjct 870732 TGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACG 870674 Query 45286 ACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| ||||| || | ||| ||||| || || || || || || |||||||| Sbjct 870673 ACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 870619 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 ||| || ||||| | | ||| | || ||||| || ||||| ||||| || || ||| Sbjct 625995 TCCGCCTCGGAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 625936 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 || || ||| || | || || || || | |||| |||||| ||||| || || Sbjct 625935 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGG 625876 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291 |||||| || || || || || || |||| || | || | ||||| |||||||||| Sbjct 625875 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAAGACTCGA 625817 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || | ||| |||||||| || || || || || |||||||| Sbjct 625816 CCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768 >seq65 Length=1908199 Score = 105 bits (116), Expect = 6e-18 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || |||||| || || ||| || | || Sbjct 1743341 TGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTGC 1743400 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | ||||||||||| ||||| |||||||| || ||||| || || Sbjct 1743401 TTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTG 1743460 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||||| |||||||| ||||| || | ||| ||||| || Sbjct 1743461 GTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 1743519 Query 45317 TAGAGTTTTTACAAAAATTTGC 45338 ||||| || ||||| |||||| Sbjct 1743520 AAGAGTCTTGACAAAGATTTGC 1743541 >seq73 Length=1824528 Score = 98.7 bits (108), Expect = 9e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || |||||| || || ||| || | || Sbjct 212668 TGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTGC 212727 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | ||||||||||| ||||| |||||||| || ||||| || || Sbjct 212728 TTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTG 212787 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||||| |||||||| ||||| || | || ||||| || Sbjct 212788 GTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 212846 Query 45317 TAGAGTTTTTACAAAAATTTGCA 45339 || || || ||||| ||||||| Sbjct 212847 GAGGGTCTTGACAAAGATTTGCA 212869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002369444120