Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq62 161 1e-34 seq73 125 9e-24 >seq62 Length=232403 Score = 161 bits (178), Expect = 1e-34 Identities = 498/764 (65%), Gaps = 15/764 (2%) Strand=Plus/Plus Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 195948 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 196007 Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550 || |||| || || ||| || ||||| | ||||||||| || || ||| |||| Sbjct 196008 GTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCG 196067 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 || || ||||||||||| | || | || || || |||| | ||||| || | | Sbjct 196068 GCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 196127 Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670 || | | || || | || ||||| || ||||||| ||||| ||| | | Sbjct 196128 CAAAGTTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTTTCGAAC 196187 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGAA 116729 | ||| |||||||| || | || || | | || || || || | | | || ||||| Sbjct 196188 AAGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 196246 Query 116730 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789 ||| | ||| | || | |||| || |||| ||| || || || || ||||||||||| Sbjct 196247 GAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 196306 Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849 |||||||||| ||| ||| |||| || | || || || || | |||| || Sbjct 196307 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAA 196366 Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG--- 116906 || | || || |||||||| || || ||||| | ||||| | || | |||| Sbjct 196367 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 196423 Query 116907 ---ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963 ||| | |||| || || | ||| || ||| | || || ||||| || | ||| Sbjct 196424 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGAT 196483 Query 116964 ACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGG 117021 || | || | ||| || || ||| ||| || ||| | | | || | || | |||| Sbjct 196484 GCCGTTCGAGTAGCCGTTCGTGCCCGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGG 196541 Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081 ||| || ||| ||||| || || ||| ||||| | |||||| | |||| || || Sbjct 196542 ATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCG 196601 Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141 ||||| || || ||||| ||| |||| | | || ||||| || ||| | || || Sbjct 196602 TAGATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGG 196661 Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 || || || || |||||||| || || | |||||| |||| Sbjct 196662 TGAGGCGTTCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAA 196705 >seq73 Length=1824528 Score = 125 bits (138), Expect = 9e-24 Identities = 294/433 (68%), Gaps = 17/433 (4%) Strand=Plus/Plus Query 176546 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 176601 ||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||| Sbjct 1166244 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 1166302 Query 176602 GAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATC 176661 | || || | |||| | || | |||| ||| |||||||| ||||| || ||||| Sbjct 1166303 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATC 1166362 Query 176662 GTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 176721 || ||| ||| | ||| ||||||||| || || || ||| | || || || Sbjct 1166363 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 1166422 Query 176722 ATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 176781 | | || || || || |||||||| |||| ||||| | ||||| ||| || | ||| Sbjct 1166423 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 1166478 Query 176782 -GAGTTGCGCCA---CTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACA 176837 ||| | || | | || || || || || |||| || || | |||||| | Sbjct 1166479 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 1166538 Query 176838 CACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 176897 |||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||||||| Sbjct 1166539 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 1166598 Query 176898 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 176955 | || || |||| ||||||||| ||||| || | | | ||| || || |||||||| Sbjct 1166599 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 1166656 Query 176956 ATCGTCCAACTTG 176968 ||| || | |||| Sbjct 1166657 ATCTTCGAGCTTG 1166669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506072680520