Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq62 161 1e-34
seq73 125 9e-24
>seq62
Length=232403
Score = 161 bits (178), Expect = 1e-34
Identities = 498/764 (65%), Gaps = 15/764 (2%)
Strand=Plus/Plus
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
||||| || |||| || || || | | ||| ||| | | |||||| || || ||
Sbjct 195948 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 196007
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||| || || ||| || ||||| | ||||||||| || || ||| ||||
Sbjct 196008 GTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCG 196067
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|| || ||||||||||| | || | || || || |||| | ||||| || | |
Sbjct 196068 GCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 196127
Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670
|| | | || || | || ||||| || ||||||| ||||| ||| | |
Sbjct 196128 CAAAGTTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTTTCGAAC 196187
Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGAA 116729
| ||| |||||||| || | || || | | || || || || | | | || |||||
Sbjct 196188 AAGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 196246
Query 116730 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789
||| | ||| | || | |||| || |||| ||| || || || || |||||||||||
Sbjct 196247 GAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 196306
Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849
|||||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 196307 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAA 196366
Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG--- 116906
|| | || || |||||||| || || ||||| | ||||| | || | ||||
Sbjct 196367 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 196423
Query 116907 ---ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963
||| | |||| || || | ||| || ||| | || || ||||| || | |||
Sbjct 196424 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGAT 196483
Query 116964 ACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGG 117021
|| | || | ||| || || ||| ||| || ||| | | | || | || | ||||
Sbjct 196484 GCCGTTCGAGTAGCCGTTCGTGCCCGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGG 196541
Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081
||| || ||| ||||| || || ||| ||||| | |||||| | |||| || ||
Sbjct 196542 ATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCG 196601
Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141
||||| || || ||||| ||| |||| | | || ||||| || ||| | || ||
Sbjct 196602 TAGATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGG 196661
Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185
|| || || || |||||||| || || | |||||| ||||
Sbjct 196662 TGAGGCGTTCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAA 196705
>seq73
Length=1824528
Score = 125 bits (138), Expect = 9e-24
Identities = 294/433 (68%), Gaps = 17/433 (4%)
Strand=Plus/Plus
Query 176546 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 176601
||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||||
Sbjct 1166244 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 1166302
Query 176602 GAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATC 176661
| || || | |||| | || | |||| ||| |||||||| ||||| || |||||
Sbjct 1166303 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATC 1166362
Query 176662 GTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 176721
|| ||| ||| | ||| ||||||||| || || || ||| | || || ||
Sbjct 1166363 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 1166422
Query 176722 ATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 176781
| | || || || || |||||||| |||| ||||| | ||||| ||| || | |||
Sbjct 1166423 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 1166478
Query 176782 -GAGTTGCGCCA---CTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACA 176837
||| | || | | || || || || || |||| || || | |||||| |
Sbjct 1166479 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 1166538
Query 176838 CACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 176897
|||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||
Sbjct 1166539 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 1166598
Query 176898 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 176955
| || || |||| ||||||||| ||||| || | | | ||| || || ||||||||
Sbjct 1166599 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 1166656
Query 176956 ATCGTCCAACTTG 176968
||| || | ||||
Sbjct 1166657 ATCTTCGAGCTTG 1166669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506072680520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |