Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq60 185 9e-42
seq109 145 8e-30
seq73 140 3e-28
seq65 122 9e-23
>seq60
Length=1146088
Score = 185 bits (204), Expect = 9e-42
Identities = 175/223 (78%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
||||||||| ||||| ||||| || |||||| | ||| || || || ||| |||||
Sbjct 223877 GATTTGAAAACCGTAGAAGCATCGAGCCTCGGCTGACTGGACCTCACCAGAGAATCGCTC 223818
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||| || |||||||||||||||||| ||||||||||||||| || |||||| |||
Sbjct 223817 GACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGAT 223758
Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
||| | |||||||| | | | | | ||||||||| || | |||||||||| |||
Sbjct 223757 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATATCCTTGGACAAGTC 223698
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437
|| ||| ||| |||||||||| || ||||||||||| ||||||
Sbjct 223697 CATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCTTTCTTGTAC 223655
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| | ||||||||||||| || | ||||||||| | || ||||| ||||||
Sbjct 224480 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 224421
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998
|| ||||| |||||||| | ||| || || |||||||| || |||| |||||
Sbjct 224420 AAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAA 224367
>seq109
Length=1431625
Score = 145 bits (160), Expect = 8e-30
Identities = 165/218 (76%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||| |||||||| || |||||| |||| |||||| | |
Sbjct 870619 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870678
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| || || |||||| | ||||
Sbjct 870679 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870736
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | || ||||| ||||| || || | ||||| ||| ||| ||||
Sbjct 870737 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870796
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || ||||||||||||
Sbjct 870797 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGT 870834
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 625084 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625143
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| |||||| | |||||
Sbjct 625144 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625202
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||||||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 625203 ACAACGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625262
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 625263 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625310
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 625312 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625371
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| |||||| | |||||
Sbjct 625372 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625430
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || ||||||||||| || || | ||||| ||| ||| |||||
Sbjct 625431 ACAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625490
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 625491 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625538
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 625540 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625599
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| |||||| | |||||
Sbjct 625600 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 625658
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || ||||||||||| || || | ||||| ||| ||| |||||
Sbjct 625659 ACAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 625718
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 625719 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625766
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| | |
Sbjct 625768 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 625827
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| ||||| ||||| |||||| | |||||
Sbjct 625828 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 625886
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 625887 ACAACGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 625946
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| ||||||| || |||||||| ||| | |||||||
Sbjct 625947 CATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGTCTCCGAGGCGG 625994
Score = 136 bits (150), Expect = 4e-27
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| |||||||| || |||||| |||| |||||| | |
Sbjct 870163 ATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870222
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| || || |||||| | ||||
Sbjct 870223 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870280
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | || ||||| ||||| || || | ||||| ||| ||| ||||
Sbjct 870281 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870340
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || |||||| |||||
Sbjct 870341 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGT 870378
Score = 136 bits (150), Expect = 4e-27
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| |||||||| || |||||| |||| |||||| | |
Sbjct 870391 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870450
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| || || |||||| | ||||
Sbjct 870451 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870508
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | || ||||| ||||| || || | ||||| ||| ||| ||||
Sbjct 870509 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870568
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || |||||| |||||
Sbjct 870569 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGT 870606
>seq73
Length=1824528
Score = 140 bits (154), Expect = 3e-28
Identities = 171/228 (75%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || ||||||||||| ||||||||| |||| |||||| | |||
Sbjct 212869 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 212810
Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
||| || | | | | |||| || |||| ||||| || || || |||||| |||||
Sbjct 212809 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCA 212752
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | || ||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 212751 GCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAA 212692
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| |||| || || |||||||| ||| || | || ||
Sbjct 212691 CATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 212644
Score = 129 bits (142), Expect = 6e-25
Identities = 164/225 (73%), Gaps = 3/225 (1%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
||| ||||| || |||||||||| ||||||| | | |||||| || | ||| | |||
Sbjct 1428437 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCGCTCGAGAACCTCTC 1428378
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||||||| || || |||| || || |||||||| ||||| |||||||| |||
Sbjct 1428377 GACCAGATTCTCATTCACGACCCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 1428318
Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
|| | ||| |||| || ||| | | | | ||||||| | ||| ||| |||||
Sbjct 1428317 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 1428258
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||| ||| ||| |||||| ||||| | ||||| |||||||||
Sbjct 1428257 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACAT 1428213
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| |||||| | | || || ||| ||| | || ||||| | ||| |||||
Sbjct 1429018 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 1428959
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
|||||| ||||| || ||| ||||||||||| ||||||||||||||||| |||| |||
Sbjct 1428958 CTCGTTGGAGAAAGACAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAAGATGGAGGC 1428899
Query 132996 GAA 132998
|||
Sbjct 1428898 GAA 1428896
>seq65
Length=1908199
Score = 122 bits (134), Expect = 9e-23
Identities = 167/228 (73%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
|||||| || || || || || |||||||| || |||||| |||| |||||| | ||||
Sbjct 1743541 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 1743482
Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363
|| || | | | | |||| || |||| ||||| || || || |||||| |||||
Sbjct 1743481 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 1743424
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | || ||||| ||||| || || | ||||| ||| ||| ||||||
Sbjct 1743423 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAAC 1743364
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||| |||| || || ||||| || || | |||| |||
Sbjct 1743363 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGGC 1743316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171880932480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |