Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq78 367 2e-96
seq105 185 1e-41
seq128 147 3e-30
seq100 105 8e-18
seq75 86.0 8e-12
>seq78
Length=3177297
Score = 367 bits (406), Expect = 2e-96
Identities = 657/959 (69%), Gaps = 3/959 (0%)
Strand=Plus/Plus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| || | ||||||||| ||||| | || ||||| || || ||||||||||||||
Sbjct 494299 TCACCAGTCAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 494358
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || || ||||| | | || || | || |||
Sbjct 494359 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 494418
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || ||||| || | ||||| || | || | || |||||||| ||
Sbjct 494419 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 494478
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || || ||||| || ||||| |||||||||||| |||| |||
Sbjct 494479 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 494538
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || ||||| || ||||| || ||||| || | || ||| | | ||| || ||
Sbjct 494539 TCGAAGCGGGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 494598
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| ||||| || || || | ||||| | |||||||| || ||||| || || || ||
Sbjct 494599 TCGATGGTAGTCTGGGCGGCGGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 494658
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| |||||| || ||||| | ||| || | ||| ||||| | || || || |||||
Sbjct 494659 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 494718
Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489
| |||||| | ||||| ||||| || ||||| |||||||| || || ||
Sbjct 494719 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 494778
Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549
||||| || ||||| || |||||||| | |||||| | || | || ||||| |||||
Sbjct 494779 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 494838
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
|| || || || || || ||||| |||||| | ||| || | | ||||| ||||| |||
Sbjct 494839 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTTTCGCCGACGGTCTTCTTGTCGAGGCCG 494898
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || || ||||||||||| || ||| ||||| | ||
Sbjct 494899 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 494958
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
| ||||| || || |||||||| ||||| ||||| |||||||| ||||| || |||
Sbjct 494959 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 495018
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789
|| |||| | ||| || | ||||| || | || ||| | || ||||| ||| ||
Sbjct 495019 ACGGCGTTAGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 495078
Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849
| ||| || || || || || | | ||||| || || || || | || || ||
Sbjct 495079 ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTACTCGACCTCG 495138
Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909
|| ||||| || | | | || ||||| | | ||| | ||||| |||
Sbjct 495139 ATGATGGGCTT---GGTTCCCTTGTCGACGACCTTGAAGGGCCAGTGCTTCATGTCGGAC 495195
Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968
||||||| | || | |||||| || || || ||||| ||||| || || |||||
Sbjct 495196 TGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 495254
>seq105
Length=3566639
Score = 185 bits (204), Expect = 1e-41
Identities = 529/807 (66%), Gaps = 15/807 (2%)
Strand=Plus/Plus
Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071
||| || |||| |||||| || || | || ||||| || || |||||||||||||| ||
Sbjct 1771711 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 1771770
Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131
|| || ||||||| | || || | || || | | || || || |||||
Sbjct 1771771 CGACTTGTTCAGTTGTCGGCCACCGAAGAACTCGGAGACGAGCGACTGGATCTTGGGGAT 1771830
Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191
|| ||||| |||||||| | ||||| || | || || | |||| ||| | |||
Sbjct 1771831 ACGGGTCGAGCCACCGACTAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 1771890
Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250
|| || ||||| || || | | | | ||||| | | | ||||
Sbjct 1771891 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 1771949
Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310
| ||||| ||||||| || || | |||| || || | | | | ||| || | |
Sbjct 1771950 CGAAACGGGCACGGGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 1772009
Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370
| | ||| || || | || || | || ||||| || ||||| ||||| | ||| |
Sbjct 1772010 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 1772069
Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430
|||||| ||||||||||||| |||| || || ||| | || | | |||||| |
Sbjct 1772070 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 1772129
Query 7431 CAGAGAAGTG-TCGAAG-GAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488
|||||| || ||| | | | | ||||| || |||||||||||||| || || ||
Sbjct 1772130 TCTTGAAGTGCTCCAAGAGGGAGTTG--TCGAAGTCCTCACCACCCAAGTGGGTGTCACC 1772187
Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548
||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || ||
Sbjct 1772188 GGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 1772247
Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599
|| || || || || || || || ||| | | || | | ||| || ||
Sbjct 1772248 TCCTCCTCCGAGATCGAAGATAAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 1772307
Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659
| |||||||||| ||||| || || || || || || || |||||||| || || ||
Sbjct 1772308 ACCGAGACCGTAAGCGATGGCAGCGGCGGTAGGCTCGTTGATAATACGGAGCACGTCCAA 1772367
Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719
|| || || ||| | || || || |||| | || ||||| ||||| ||||| || ||
Sbjct 1772368 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAAAGACGCTGCGAGTCGTTGAAGTAAGCGGG 1772427
Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779
||| || ||||| || | | |||| | || ||||| | | || ||| | || || |
Sbjct 1772428 GACGGTGACGACGGCCTTCTTGACCTCCTGGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 1772487
Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806
|||| ||| ||||| || || |||||
Sbjct 1772488 CTTGGAAAGGACCATGGACGAGATCTC 1772514
Score = 104 bits (114), Expect = 3e-17
Identities = 115/153 (75%), Gaps = 3/153 (2%)
Strand=Plus/Plus
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| |||| ||| || || ||||| || | | | || || ||||| || || |||||
Sbjct 1772768 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1772824
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112
|| || || || |||||||| || || || || || ||||||||||||||||| |||||
Sbjct 1772825 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1772884
Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| || || || ||||| | ||| ||||| ||
Sbjct 1772885 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 1772917
>seq128
Length=305336
Score = 147 bits (162), Expect = 3e-30
Identities = 246/355 (69%), Gaps = 3/355 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || ||||| || ||| ||||||| |||
Sbjct 143074 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 143015
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | ||| ||||| ||||| || || || || || | | || | |
Sbjct 143014 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 142955
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | | | |||| ||||||||||| ||||| || || || || || ||
Sbjct 142954 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 142898
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | | || ||| |||||| || || || || | || || || ||||||||||||
Sbjct 142897 TTGACGACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 142838
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||||||||| || ||||| |||| || || ||||| || |
Sbjct 142837 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAAG 142778
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811
|| | || ||| | || ||||| ||| | | ||| | || ||||| ||||
Sbjct 142777 TAGGCCTCGGCGGTCTCCTTCATCTTGCCCAAGATCATGGCCGAGATCTCCTCAG 142723
>seq100
Length=1849583
Score = 105 bits (116), Expect = 8e-18
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660
|||||||||||||||| || || || || || || || || | ||| || || ||
Sbjct 1562963 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 1563022
Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720
||||| || || | || || || ||||| ||||| ||||| ||||| |||||||| |||
Sbjct 1563023 CCAGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 1563082
Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780
|| || ||||| |||| | |||| ||| ||||| || || ||| | || |||||
Sbjct 1563083 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 1563142
Query 7781 TTG 7783
|||
Sbjct 1563143 TTG 1563145
>seq75
Length=589559
Score = 86.0 bits (94), Expect = 8e-12
Identities = 242/369 (66%), Gaps = 2/369 (1%)
Strand=Plus/Plus
Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503
|| || || || || || || ||| | ||||| || || || || || ||| ||
Sbjct 48499 TTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAG 48558
Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562
| || || || ||||| ||||| || || || || || || ||| | | ||| |
Sbjct 48559 ACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATC 48618
Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622
| || || || | || || ||||| |||| || ||||| ||||| ||||||||||
Sbjct 48619 GTCAAG-AACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCA 48677
Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682
||| || ||| | || ||| | ||| || || | || || | | | |||||| |
Sbjct 48678 CGAGTCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGCTGTCGCCGA 48737
Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742
||| ||| |||| | || | ||||| || || | || || || || |||||
Sbjct 48738 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTG 48797
Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802
||| || || ||||| ||||| | ||||||||| || | || ||||| | || ||
Sbjct 48798 GGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 48857
Query 22803 AGATTTTGT 22811
|| |||||
Sbjct 48858 CGACTTTGT 48866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131632943480
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