Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq78 367 2e-96 seq105 185 1e-41 seq128 147 3e-30 seq100 105 8e-18 seq75 86.0 8e-12 >seq78 Length=3177297 Score = 367 bits (406), Expect = 2e-96 Identities = 657/959 (69%), Gaps = 3/959 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 494299 TCACCAGTCAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 494358 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | || ||| Sbjct 494359 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 494418 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| || Sbjct 494419 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 494478 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| |||||||||||| |||| ||| Sbjct 494479 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 494538 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | || ||| | | ||| || || Sbjct 494539 TCGAAGCGGGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 494598 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | ||||| | |||||||| || ||||| || || || || Sbjct 494599 TCGATGGTAGTCTGGGCGGCGGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 494658 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 494659 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 494718 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 494719 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 494778 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | || | || ||||| ||||| Sbjct 494779 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 494838 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 494839 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTTTCGCCGACGGTCTTCTTGTCGAGGCCG 494898 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||||||||| || ||| ||||| | || Sbjct 494899 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 494958 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 494959 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 495018 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || ||| | || ||||| ||| || Sbjct 495019 ACGGCGTTAGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 495078 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || || || || | | ||||| || || || || | || || || Sbjct 495079 ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTACTCGACCTCG 495138 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 || ||||| || | | | || ||||| | | ||| | ||||| ||| Sbjct 495139 ATGATGGGCTT---GGTTCCCTTGTCGACGACCTTGAAGGGCCAGTGCTTCATGTCGGAC 495195 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| | || | |||||| || || || ||||| ||||| || || ||||| Sbjct 495196 TGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 495254 >seq105 Length=3566639 Score = 185 bits (204), Expect = 1e-41 Identities = 529/807 (66%), Gaps = 15/807 (2%) Strand=Plus/Plus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 1771711 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 1771770 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || ||||||| | || || | || || | | || || || ||||| Sbjct 1771771 CGACTTGTTCAGTTGTCGGCCACCGAAGAACTCGGAGACGAGCGACTGGATCTTGGGGAT 1771830 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 1771831 ACGGGTCGAGCCACCGACTAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 1771890 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 || || ||||| || || | | | | ||||| | | | |||| Sbjct 1771891 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 1771949 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | ||||| ||||||| || || | |||| || || | | | | ||| || | | Sbjct 1771950 CGAAACGGGCACGGGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 1772009 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 1772010 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 1772069 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 1772070 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 1772129 Query 7431 CAGAGAAGTG-TCGAAG-GAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| || ||| | | | | ||||| || |||||||||||||| || || || Sbjct 1772130 TCTTGAAGTGCTCCAAGAGGGAGTTG--TCGAAGTCCTCACCACCCAAGTGGGTGTCACC 1772187 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 1772188 GGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 1772247 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599 || || || || || || || || ||| | | || | | ||| || || Sbjct 1772248 TCCTCCTCCGAGATCGAAGATAAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 1772307 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | |||||||||| ||||| || || || || || || || |||||||| || || || Sbjct 1772308 ACCGAGACCGTAAGCGATGGCAGCGGCGGTAGGCTCGTTGATAATACGGAGCACGTCCAA 1772367 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 1772368 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAAAGACGCTGCGAGTCGTTGAAGTAAGCGGG 1772427 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | || ||||| | | || ||| | || || | Sbjct 1772428 GACGGTGACGACGGCCTTCTTGACCTCCTGGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 1772487 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||| ||||| || || ||||| Sbjct 1772488 CTTGGAAAGGACCATGGACGAGATCTC 1772514 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 1772768 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1772824 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 1772825 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1772884 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 1772885 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 1772917 >seq128 Length=305336 Score = 147 bits (162), Expect = 3e-30 Identities = 246/355 (69%), Gaps = 3/355 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 143074 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 143015 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 143014 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 142955 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 142954 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 142898 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | || ||| |||||| || || || || | || || || |||||||||||| Sbjct 142897 TTGACGACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 142838 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| || || ||||| || | Sbjct 142837 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAAG 142778 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || | || ||| | || ||||| ||| | | ||| | || ||||| |||| Sbjct 142777 TAGGCCTCGGCGGTCTCCTTCATCTTGCCCAAGATCATGGCCGAGATCTCCTCAG 142723 >seq100 Length=1849583 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || || || | ||| || || || Sbjct 1562963 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 1563022 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 ||||| || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 1563023 CCAGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 1563082 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 1563083 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 1563142 Query 7781 TTG 7783 ||| Sbjct 1563143 TTG 1563145 >seq75 Length=589559 Score = 86.0 bits (94), Expect = 8e-12 Identities = 242/369 (66%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || || || || || ||| | ||||| || || || || || ||| || Sbjct 48499 TTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAG 48558 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | || || || ||||| ||||| || || || || || || ||| | | ||| | Sbjct 48559 ACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATC 48618 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || ||||| |||| || ||||| ||||| |||||||||| Sbjct 48619 GTCAAG-AACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCA 48677 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | ||| || || | || || | | | |||||| | Sbjct 48678 CGAGTCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGCTGTCGCCGA 48737 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || || | || || || || ||||| Sbjct 48738 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTG 48797 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || || ||||| ||||| | ||||||||| || | || ||||| | || || Sbjct 48798 GGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 48857 Query 22803 AGATTTTGT 22811 || ||||| Sbjct 48858 CGACTTTGT 48866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131632943480