Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq62 131 2e-25
>seq62
Length=232403
Score = 131 bits (144), Expect = 2e-25
Identities = 427/657 (65%), Gaps = 6/657 (1%)
Strand=Plus/Plus
Query 110375 CCAAG-TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTA 110433
||||| ||||| || |||||||| ||| || || || ||||||||| | ||| |
Sbjct 196035 CCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCGGCGTCTTTGTAGAGCATGAAGGGGTTG 196094
Query 110434 CCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCG 110493
|||||||| ||| | | ||||| || | ||| | | ||||||| ||
Sbjct 196095 CCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGTTTTTGCGCGGGGATCGTCTTC 196154
Query 110494 TTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA 110553
|| ||| | || |||| ||||| || | ||||| | || || | || || ||
Sbjct 196155 TTGGCGCGGCCCTCCTTTTCGTATTTTTCGAACAAGGCGCGGAACTCTTCGCCATAGACT 196214
Query 110554 TCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACC 110613
|| || || || | |||| |||||||||| ||| | || | |||| ||
Sbjct 196215 TCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACA 196274
Query 110614 CTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCT 110673
| || ||| ||||| || |||||||| | ||| |||| || ||||| || | ||
Sbjct 196275 CGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCC 196334
Query 110674 TCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCG 110733
|| | || ||||| ||| || |||| || || | || || | ||||||||| |||
Sbjct 196335 TCCTTGCCATGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCATGGCTCG 196394
Query 110734 AGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCT-GGTTAACATAGCGTGCTGTG 110790
|| |||| |||| || ||| ||| || ||| ||| || ||||| || |||
Sbjct 196395 AGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTG 196454
Query 110791 GCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT 110850
||| |||| | |||||| || | || || | || | || || || ||| ||
Sbjct 196455 TTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCCGCGATG 196514
Query 110851 CTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTA 110910
||| | || || |||| |||||| || ||| |||||||| || |||
Sbjct 196515 TAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAG 196574
Query 110911 ATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGC 110969
|| | || ||| ||| |||| || | || || || ||||||||||| |||| | |
Sbjct 196575 ATGAGCGCGCACGTCT-TGAGCGTGTCGTAGATGCCTTCAATCGAATCATCCTTCATCGT 196633
Query 110970 AATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026
| || || || || || | ||| || |||||||||| |||||||||||||| ||
Sbjct 196634 GACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCATTGAAGAGTGTCGG 196690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974917756600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |