Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq62 158 2e-33 seq73 118 2e-21 >seq62 Length=232403 Score = 158 bits (174), Expect = 2e-33 Identities = 606/943 (64%), Gaps = 28/943 (3%) Strand=Plus/Plus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || || | | ||||| Sbjct 195660 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTG 195719 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | |||| | || || || Sbjct 195720 AGCTTGCGCGCCTCGGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 195779 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 195780 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CTCGATGAC 195838 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 ||| || |||| ||||||||| ||| | |||| | | | || ||| ||| | Sbjct 195839 GGGATAGTAGTTAACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 195898 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | || | || | || |||| | |||| || | || ||| |||| |||| Sbjct 195899 GTGCAACTTCT------TAAAGTCGTAAGCGCCGTTCTTGATGAAGCTC-GGCAACGCGA 195951 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 | ||||| |||||| ||||| ||| | | | | |||||| ||||||||||||| Sbjct 195952 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGC 196011 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609 ||||||| | ||| ||||| ||||||| ||||| || ||| ||| || | | Sbjct 196012 ACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCGGCGT 196071 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 | |||||||||||| ||||| || || || | ||||| | || ||| | ||| | Sbjct 196072 CTTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAA 196131 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726 | | || || | | | || | ||| | | || ||||| | |||| Sbjct 196132 GTTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTTTCGA 196185 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783 | | || ||| || | ||| |||| || || || || || | ||||| | Sbjct 196186 ACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGG---GGCTTCAGCGGGGC 196242 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 | | |||| ||| || ||| | | ||| | || ||| ||||| || || | ||| | Sbjct 196243 AGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGA 196302 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 |||| ||| || || | | | || ||| ||| ||| ||||| || || | Sbjct 196303 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCA 196362 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960 | || || |||| ||| |||||||| ||||| | |||||| || ||||| || | || Sbjct 196363 GGAACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 196422 Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020 | ||||| || ||||| || | || ||||| ||| || || | ||| || | Sbjct 196423 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 196482 Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080 ||||| || | ||||| || ||||| || || ||||||| || | | |||| | Sbjct 196483 TGCCGTTCGAGTAGCCGTTCGTGCCCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGA 196542 Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 || | || || ||||||||| ||||||||| | ||||| Sbjct 196543 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCA 196585 >seq73 Length=1824528 Score = 118 bits (130), Expect = 2e-21 Identities = 167/234 (71%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 |||||| ||||| || ||| ||| ||||| | |||||| || | ||||| ||||| Sbjct 1428437 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCGCTCGAGAACCTCTC 1428378 Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 | |||||||||||| || | |||||| ||||| || |||||||| || || || | Sbjct 1428377 GACCAGATTCTCATTCACGACCCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 1428318 Query 48574 GAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630 || | ||| |||| || | |||| | |||| | || | ||| ||||| ||||| Sbjct 1428317 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 1428258 Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | ||||| | | ||| |||||||| | |||| |||||||||| |||| || Sbjct 1428257 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAAT 1428204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531088308480