Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq62 235 7e-56
seq100 102 1e-15
seq109 96.9 4e-14
>seq62
Length=232403
Score = 235 bits (260), Expect = 7e-56
Identities = 337/471 (72%), Gaps = 19/471 (4%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| |||| ||| |||| ||||||||||| |||| |||||| ||
Sbjct 196434 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 196493
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| |||||||| | ||||| ||||| ||||| | ||||| | || |||
Sbjct 196494 TAGCCGTTCGTGCCCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 196553
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 196554 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCA 196613
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| || ||||||| || || || |||||||| |||||||| | ||| |||
Sbjct 196614 ATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCG 196673
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA-GGT 1630364
|| |||||||| || |||| || |||||| | || |||||| || ||| | |
Sbjct 196674 GCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGTACGAT 196733
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | |||| | ||| | ||||||
Sbjct 196734 TGCAAG-ACGCGC------------TCGATGTCGTGA---CCATGGATGCCAACGGCGAC 196777
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCG-CGCACCTTGGTCAGGTAGG 1630483
||||||||||||| ||| || || ||| | || |||| || | | || |||||
Sbjct 196778 ACGCATGAGCATGTGCTGCGGGCGTTCGGCTACCTTGCCGTCGATGCGAAG-CAAGTAGG 196836
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
| || | || ||| |||||||||| || | |||||||||||||
Sbjct 196837 AGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGT 196887
Score = 125 bits (138), Expect = 9e-23
Identities = 176/242 (73%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
|||||||||||||||| ||| || || |||||| | ||||||| |||||||||||
Sbjct 194823 TGGTCGACGGTAAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCCC 194882
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG 1627101
||||| || || || ||| ||||| |||||||||||||| || | ||| | |
Sbjct 194883 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGTTGGG 194942
Query 1627102 -TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGC 1627160
||| | ||| | ||||||||| || |||||||| ||| | ||||||||||
Sbjct 194943 CTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCGCCTCGATCGGCCGA 195001
Query 1627161 CATGTCGATGGTGACCCGGTTG-GGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219
|| ||||| | | | ||| | | |||||| ||||||||| ||||||||||||| |
Sbjct 195002 CAGATCGATAAT-AGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 195060
Query 1627220 CG 1627221
||
Sbjct 195061 CG 195062
Score = 111 bits (122), Expect = 2e-18
Identities = 291/450 (65%), Gaps = 2/450 (0%)
Strand=Plus/Plus
Query 1628152 GGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTC 1628211
|||| ||| ||| || |||||||||||||||||| | |||| | |||| || ||||||
Sbjct 195984 GGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTC 196043
Query 1628212 TGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCG 1628271
| ||||| | | ||| ||||||| |||| ||||||| |||| ||| || |||
Sbjct 196044 TTTTGGTTCGATTTTTTGTTCGCGGCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCG 196103
Query 1628272 ATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGCG 1628330
| ||| || | | || || |||| | | ||||||| | || | || |||||
Sbjct 196104 ACCTGGGCTTCAAGAATCGCGTACCAAAGTTTTTGCGCGGGGATCGTCT-TCTTGGCGCG 196162
Query 1628331 GCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAG 1628390
||||| || | |||| ||| ||||| ||
Sbjct 196163 GCCCTCCTTTTCGTATTTTTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAG 196222
Query 1628391 GCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCAT 1628450
|||||| || || | || || ||||| | ||| ||||| ||| | | | || |||
Sbjct 196223 GCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCAT 196282
Query 1628451 AAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCC 1628510
||| || || |||| || || | ||||| || || || ||| |||||||||||
Sbjct 196283 AAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCC 196342
Query 1628511 GTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCA 1628570
|||||||| ||||| || | |||| | ||| |||||||| ||||| ||||||
Sbjct 196343 ATGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGAT 196402
Query 1628571 GGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
|| ||||| || |||||| ||| ||
Sbjct 196403 CGCGAAGGCTCCGGGACGCTTGTTGCCACC 196432
>seq100
Length=1849583
Score = 102 bits (112), Expect = 1e-15
Identities = 151/212 (71%), Gaps = 9/212 (4%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || ||| || | | ||||| ||| || | ||||||||||||||||| | ||
Sbjct 202148 GCTTGGACAATTCTCCAGGGAGGATCAAGCGAACCGAGGTCTGGATCTCGCGCGAGGAGA 202089
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
|||| ||| | |||| || ||| || | |||||| | ||| || ||||
Sbjct 202088 TCGTCGCCTTGTGGTTGT---AGGTCGCGAGCTTGGAAGCCTCGAGGGAGATACGCTCGA 202032
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| ||| |||||
Sbjct 202031 AGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCCGTGTCGG 201972
Query 1254520 GGTGCACCTGCTTGAGCACCT---TGTAGATG 1254548
|||| || ||||| | ||| | ||||||||
Sbjct 201971 GGTGGACTTGCTTCAACACTTTGCTGTAGATG 201940
Score = 93.3 bits (102), Expect = 5e-13
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 520092 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 520151
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||| | |||| || ||| || | || ||| | |||||| || |
Sbjct 520152 TGGTCGCCTTGTGGTTGT---AGGTCGCGAGCTTGGACGCTTCGAGGGTGATGCGCTCAA 520208
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | ||||| |||||| ||||| || |||||
Sbjct 520209 AGATGTCGTTGACGAACGAGTTGAGGATCAGCATCGCCTTGTTCGAGATACCGGTGTCGG 520268
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| || ||||| | |||||||
Sbjct 520269 GGTGGACTTGCTTCAACACCTTG 520291
Score = 93.3 bits (102), Expect = 5e-13
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 1292028 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 1291969
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||| | |||| || ||| || | || ||| | |||||| || |
Sbjct 1291968 TGGTCGCCTTGTGGTTGT---AGGTCGCGAGCTTGGACGCTTCGAGGGTGATGCGCTCAA 1291912
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | ||||| |||||| ||||| || |||||
Sbjct 1291911 AGATGTCGTTGACGAACGAGTTGAGGATCAGCATCGCCTTGTTCGAGATACCGGTGTCGG 1291852
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| || ||||| | |||||||
Sbjct 1291851 GGTGGACTTGCTTCAACACCTTG 1291829
>seq109
Length=1431625
Score = 96.9 bits (106), Expect = 4e-14
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 377190 ATCGGTGGGACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCCGTG 377131
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | ||||||||||||||||||||||| || ||||||||
Sbjct 377130 -TTCGACAAGCTGGAAGCCCTCTTGGCCCACGCCATGCTGTCGATCCCTGCAACCAAGGG 377072
Query 19172 ATTCGAGATTGG 19183
|| || |||||
Sbjct 377071 CTTTGAAATTGG 377060
Score = 87.8 bits (96), Expect = 2e-11
Identities = 153/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 1574008 TCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCG 1574067
|||||||||| ||||| ||||||| |||| || | | || || || || |
Sbjct 462911 TCGACGTCGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGG 462970
Query 1574068 GACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGG 1574127
| ||||||||| | ||||||||||||| ||||| | | || ||| |||||||| |
Sbjct 462971 GCCGCCACAAGCTCGTCATCCTCGACGAAGCCGATTCGATGACCCCGGGAGCCCAGCAAG 463030
Query 1574128 CCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACA 1574187
| || || || |||||| | ||||||| || ||||| ||| | |||||||||
Sbjct 463031 CGCTCCGCAGGACGATGGAACTCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACC 463090
Query 1574188 CGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCAT 1574230
| | | |||||||| | | || ||||| ||||||||
Sbjct 463091 AGAGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCAT 463133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107127136491599
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