Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq109 136 4e-27 seq73 127 2e-24 seq65 120 3e-22 >seq109 Length=1431625 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| ||||| || || || || || || ||||| || || | | Sbjct 870162 GATGCAGATCTTCGTTAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 870221 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || || ||||| |||||||| ||||| || || || || | Sbjct 870222 GGACACGATTGACAACGTCAAGAC-CAAGATTCAAGACAAGGAAGGCATTCCCCCAGACC 870280 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||| || ||||||||||| || || ||||| |||||| | | | | ||||| | Sbjct 870281 AACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 870340 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||||| ||||| || |||||||||||||| | ||||| || Sbjct 870341 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCGTCTCCGCGGTGG 870389 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || || ||||| || || | | Sbjct 870391 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870450 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||||| |||||||| ||||| || || || || || Sbjct 870451 GACACGATTGACAACGTCAAGAC-CAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCA 870509 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 870510 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 870569 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || |||||||||||||| Sbjct 870570 CATCCAGAAGGAGTCGACGCTCCACTTGGTGTTGCG 870605 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| || || || || || || ||||| || || | | Sbjct 870619 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 870678 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || || ||| |||||||| ||||| || || || || || Sbjct 870679 GACACGATTGACAACGTCAAGACCAA-GATTCAAGACAAGGAAGGCATTCCCCCAGACCA 870737 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 870738 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 870797 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||||||||| |||| Sbjct 870798 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 870833 >seq73 Length=1824528 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| |||||| | || || || || || || || || || ||||| || || | ||| Sbjct 212869 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 212810 Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || |||| || || || |||||||||||| ||||| || || || || || Sbjct 212809 ACACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 212751 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||||| |||||| | | | | ||||| ||| Sbjct 212750 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAAC 212691 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || ||||||||| | || |||| || || Sbjct 212690 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 212644 >seq65 Length=1908199 Score = 120 bits (132), Expect = 3e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| |||||| | || || || || || || || || || ||||| || || | |||| Sbjct 1743541 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 1743482 Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 ||| | || |||| || || || |||||||||||| ||||| || || || || || | Sbjct 1743481 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 1743423 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | | ||||| |||| Sbjct 1743422 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAACA 1743363 Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||| ||||| || |||||||| Sbjct 1743362 TCCAAAAGGAGTCGACCCTCCACTTGGT 1743335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896773313160