Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq99 109 5e-19
seq73 91.5 1e-13
seq109 89.7 4e-13
seq65 82.4 6e-11
>seq99
Length=438116
Score = 109 bits (120), Expect = 5e-19
Identities = 277/408 (68%), Gaps = 15/408 (4%)
Strand=Plus/Minus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261
|| ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | |
Sbjct 79569 GGAGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 79512
Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319
||||| || |||||| | || || ||| ||| | || | || |||||||||
Sbjct 79511 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGCTC 79457
Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379
|| || || || | || || |||| ||| |||||| |||||| | || ||||
Sbjct 79456 CGTTTCGGGATTCTTGCACGACGCGCACAGCACGAACTTGTCGATGAAGACGTCGAGCAA 79397
Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439
||| | | | | ||||| | ||| ||||||||| | |||||| | | | |
Sbjct 79396 GTCACGCAGACGATTCGTCTCGTGCGCGCCATTGACGATGTAGCGTTCGGTCTCATCGTT 79337
Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499
|| || || ||||| || |||||||| ||| |||| |||||||| | ||| ||
Sbjct 79336 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCG 79277
Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| |||| || |||| || | ||||||| | |||||||| |||||||||||
Sbjct 79276 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTCTTAATGCCGTTGCCGC 79218
Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGG-CATTTTGTAGCGGTAGAAC 34605
|| |||| ||||| ||| ||| || ||| |||||||||||||||
Sbjct 79217 GACCCTCGATCTTGGTCAAGA-GCGAGGGCATCTTGTAGCGGTAGAAC 79171
>seq73
Length=1824528
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326
|||| | ||||||| |||||||| || | || ||||| ||||| ||| |||| |||
Sbjct 212876 TTTACAGTGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAG 212817
Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386
| ||| || ||| | | || || ||||| ||||| |||||| | ||
Sbjct 212816 TCGTCCGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCA 212757
Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446
|| || ||| | || || | ||| || || ||||| ||||||| | | || | || |||
Sbjct 212756 GACCAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGAT 212697
Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| ||||| || || || | ||| ||||| | | ||||| || ||
Sbjct 212696 TACAACATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 212644
>seq109
Length=1431625
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | |||||||| || || || |||| ||| |
Sbjct 625312 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625371
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||| || || || ||| | ||| || |||
Sbjct 625372 GACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAA 625431
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| |||| || | ||| || |||||||| ||||||| | | || | || |||||||||
Sbjct 625432 CAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 625491
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 625492 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625538
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | |||||||| || || || |||| ||| |
Sbjct 625540 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 625599
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||| || || || ||| | ||| || |||
Sbjct 625600 GACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAA 625659
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| |||| || | ||| || |||||||| ||||||| | | || | || |||||||||
Sbjct 625660 CAACGACTGATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 625719
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 625720 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 625766
>seq65
Length=1908199
Score = 82.4 bits (90), Expect = 6e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 110275 GCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGA 110334
|||||| |||||||| ||| | || ||||| || || ||| |||| ||| | |||
Sbjct 1743541 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 1743482
Query 110335 TACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACA 110394
|| ||| | | || || ||||| ||||| |||||| | || || || ||
Sbjct 1743481 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 1743422
Query 110395 AAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACAT 110454
| | || || | ||| || || ||||| ||||||| | | || | || |||||||||||
Sbjct 1743421 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAACAT 1743362
Query 110455 TCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || || || | ||| |||| | | || ||||| ||
Sbjct 1743361 CCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGG 1743317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840860368471
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |