Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq62 201 2e-45
seq100 122 1e-21
seq73 116 6e-20
seq60 113 7e-19
seq109 86.0 1e-10
>seq62
Length=232403
Score = 201 bits (222), Expect = 2e-45
Identities = 200/259 (77%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|||||||| |||||||| |||| ||| |||| ||||||||||| || | |||||| ||
Sbjct 196434 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 196493
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
| |||||| |||||||| | ||||| ||| | ||||| | ||||| | || |||
Sbjct 196494 TAGCCGTTCGTGCCCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 196553
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || ||||| | ||||||||||||||||||| | || ||||| ||||||||||| ||
Sbjct 196554 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCA 196613
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
||||| || ||||||| | ||| || |||||||| |||||| | | ||| |||
Sbjct 196614 ATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCG 196673
Query 2073781 GCATTGAAGAGCGTGGGCG 2073799
||||||||||| || ||||
Sbjct 196674 GCATTGAAGAGTGTCGGCG 196692
Score = 145 bits (160), Expect = 1e-28
Identities = 298/449 (66%), Gaps = 0/449 (0%)
Strand=Plus/Plus
Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623
|||| ||| ||| || || ||||||||||||||| | |||| | | ||||| ||||||
Sbjct 195984 GGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTC 196043
Query 2071624 TGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCG 2071683
| ||||| | ||| ||||||| |||| |||||| |||| || || |||
Sbjct 196044 TTTTGGTTCGATTTTTTGTTCGCGGCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCG 196103
Query 2071684 ATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGG 2071743
| ||| || | || || |||||| || ||||||| | || || | ||||||
Sbjct 196104 ACCTGGGCTTCAAGAATCGCGTACCAAAGTTTTTGCGCGGGGATCGTCTTCTTGGCGCGG 196163
Query 2071744 CCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGG 2071803
|||| | | |||| || | |||| | | ||||| |||
Sbjct 196164 CCCTCCTTTTCGTATTTTTCGAACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGG 196223
Query 2071804 CCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATA 2071863
||||| || || | ||||| ||||| | ||| |||||| | | | | || || ||||
Sbjct 196224 CCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATA 196283
Query 2071864 AACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCG 2071923
||||| ||| |||| || | | |||||||| || || ||| |||||||||||
Sbjct 196284 AACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCA 196343
Query 2071924 TGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAG 2071983
|||||||| ||||| || | |||| || ||| |||||||| ||||| ||||||
Sbjct 196344 TGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATC 196403
Query 2071984 GCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|| ||||| || |||||| ||| ||
Sbjct 196404 GCGAAGGCTCCGGGACGCTTGTTGCCACC 196432
Score = 116 bits (128), Expect = 6e-20
Identities = 173/240 (72%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310
|||||||||||||||| ||| || | |||| | || ||||||| |||||||||||
Sbjct 194823 TGGTCGACGGTAAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCCC 194882
Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGA-TGGACTCGGCATTCGG 2069369
||||| || || || ||| ||||| |||||||||||||| | | | | || ||
Sbjct 194883 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGTTGGG 194942
Query 2069370 GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGC 2069429
|| || ||| || ||||||||| || |||||||| ||| | || |||||||
Sbjct 194943 CTCGACA-AGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCGCCTCGATCGGCCGA 195001
Query 2069430 CATGTCGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGAGAT 2069488
|| ||||| | | | ||| || | |||||| ||||||||| | | |||||||||||
Sbjct 195002 CAGATCGATAAT-AGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 195060
Score = 89.7 bits (98), Expect = 8e-12
Identities = 140/196 (71%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCT 2070109
||| || |||||||| ||||| ||||| ||| |||||| ||||| ||| |
Sbjct 195683 CGCGGCGTGGTAGATGGTCTCGAAGATT-TGCTTGTTGAGCTTGCGCGCCTCGGGCGAAT 195741
Query 2070110 CCCACGGCAGGTCCATCATGGCA--AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCAT 2070167
| |||||| ||| | | || ||||||||||| || || ||||| |||| ||| ||
Sbjct 195742 CGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGAT 195799
Query 2070168 CGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
|| |||||||| | ||| |||| | | |||||| || || |||| ||| | ||||||
Sbjct 195800 GGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTAACGTCGAT 195859
Query 2070228 CACGCGGTTGAGGTTG 2070243
| |||||| | ||||
Sbjct 195860 GATGCGGTTCAAGTTG 195875
>seq100
Length=1849583
Score = 122 bits (134), Expect = 1e-21
Identities = 164/227 (72%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
||||||| || || |||| ||||||| ||| || ||| || | | ||||| ||| || |
Sbjct 202172 CCTTGGTGCCTTCCGAGATGGCGTGCTTGGACAATTCTCCAGGGAGGATCAAGCGAACCG 202113
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
||||||||||||||| | | |||||| ||| | |||| || ||| || |
Sbjct 202112 AGGTCTGGATCTCGCGCGAGGAGATCGTCGCCTTGTGGTTGTAGGT---CGCGAGCTTGG 202056
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|||||| | ||| || |||| ||||||||||| |||||||| | ||| |||||
Sbjct 202055 AAGCCTCGAGGGAGATACGCTCGAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCG 201996
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| ||| ||||||||| || ||||| | ||| |||
Sbjct 201995 CCTTGTTCGAGATACCCGTGTCGGGGTGGACTTGCTTCAACACTTTG 201949
Score = 109 bits (120), Expect = 9e-18
Identities = 161/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
|||| || || || |||| ||||||| ||| ||| || ||| | | ||||| || || |
Sbjct 520068 CCTTTGTGCCTTCCGAGATGGCGTGCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCG 520127
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
||||||||||||||| | ||| || ||| | |||| || ||| || |
Sbjct 520128 AGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGTGGTTGTAGGT---CGCGAGCTTGG 520184
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|| ||| | |||||| || | ||||||||||| |||||||| | |||| |||||
Sbjct 520185 ACGCTTCGAGGGTGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATCAGCATCG 520244
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| || ||||||||| || ||||| | |||||||
Sbjct 520245 CCTTGTTCGAGATACCGGTGTCGGGGTGGACTTGCTTCAACACCTTG 520291
Score = 109 bits (120), Expect = 9e-18
Identities = 161/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
|||| || || || |||| ||||||| ||| ||| || ||| | | ||||| || || |
Sbjct 1292052 CCTTTGTGCCTTCCGAGATGGCGTGCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCG 1291993
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
||||||||||||||| | ||| || ||| | |||| || ||| || |
Sbjct 1291992 AGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGTGGTTGTAGGT---CGCGAGCTTGG 1291936
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|| ||| | |||||| || | ||||||||||| |||||||| | |||| |||||
Sbjct 1291935 ACGCTTCGAGGGTGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATCAGCATCG 1291876
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| || ||||||||| || ||||| | |||||||
Sbjct 1291875 CCTTGTTCGAGATACCGGTGTCGGGGTGGACTTGCTTCAACACCTTG 1291829
>seq73
Length=1824528
Score = 116 bits (128), Expect = 6e-20
Identities = 158/220 (72%), Gaps = 3/220 (1%)
Strand=Plus/Minus
Query 796140 AAAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGC 796199
||| ||||| ||||||| | || ||||| || ||| | || |||| ||||||
Sbjct 1428422 AAAGCACCTCGCCTCGGCGAACTGCACCTCGCTCGAGAACCTCTCGACCAGATTCTCATT 1428363
Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259
||||| || || |||||||| |||||||| ||||| |||||||| || |||||
Sbjct 1428362 CACGACCCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGGGCGATAAAGTAGCGTTCGTC 1428303
Query 796260 GTCGCTGAGCGAGAC---CCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGT 796316
|| | ||||| | ||||| | |||| ||||||||||| ||| |||||||
Sbjct 1428302 GTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTCGATCTCTTCGGCGGA 1428243
Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356
||||||||| || | ||| | ||||||||| |||| |||
Sbjct 1428242 CCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAATC 1428203
>seq60
Length=1146088
Score = 113 bits (124), Expect = 7e-19
Identities = 144/198 (73%), Gaps = 3/198 (2%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||||| | |||||||| ||| || || ||| |||||| |||||||||
Sbjct 223852 GCCTCGGCTGACTGGACCTCACCAGAGAATCGCTCGACCAAGTTCTCGTTGACGATGCCG 223793
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| ||||||||||||||||||||||||| ||| |||| ||||||||| |||||
Sbjct 223792 TCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCGTCGGGCTTGAGC 223733
Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
| |||||| | | | || | | ||| | ||| |||||||||||||||||
Sbjct 223732 TTGTTGTCCCAGTCGTGCATATCCTTGGACAAGTCCATCTCTTCGGCGGTCCAAAAGGAT 223673
Query 796327 GCCTCGGCCTTTTTGTAC 796344
|||||||| || ||||||
Sbjct 223672 GCCTCGGCTTTCTTGTAC 223655
>seq109
Length=1431625
Score = 86.0 bits (94), Expect = 1e-10
Identities = 170/252 (67%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 2019147 GACGTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGC 2019206
|||||||| || | ||||||| | ||| ||||| || || || || |||
Sbjct 462913 GACGTCGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGGGC 462972
Query 2019207 CGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCC 2019266
||||||||| | |||||||||| || ||||| | | || ||| |||||||| ||
Sbjct 462973 CGCCACAAGCTCGTCATCCTCGACGAAGCCGATTCGATGACCCCGGGAGCCCAGCAAGCG 463032
Query 2019267 CTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACG 2019326
||||| ||| |||||| | | ||||||| || || || || | || |||||| |
Sbjct 463033 CTCCGCAGGACGATGGAACTCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACCAG 463092
Query 2019327 TCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTC 2019386
| | ||||||| | | ||||| || |||||||||||| | | || | ||
Sbjct 463093 AGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCATCTTGAGGTACTCGAGGCTG 463152
Query 2019387 ACCGACGCCCAG 2019398
||||| ||| ||
Sbjct 463153 ACCGATGCCGAG 463164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916230762939533
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