Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq73 123 2e-23
seq65 118 7e-22
seq109 113 3e-20
>seq73
Length=1824528
Score = 123 bits (136), Expect = 2e-23
Identities = 154/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| |||||| || ||||| || || | || |||| ||||
Sbjct 212659 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCC 212718
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || |||||||||||| |||| | || ||||||||
Sbjct 212719 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 212778
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| || | ||| ||||||
Sbjct 212779 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 212838
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976
|| |||||||||||||| |||||||| ||||
Sbjct 212839 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 212869
>seq65
Length=1908199
Score = 118 bits (130), Expect = 7e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| |||||| || ||||| || || | || |||| ||||
Sbjct 1743332 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCC 1743391
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || |||||||||||| |||| | || ||||||||
Sbjct 1743392 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 1743451
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| || | ||| || |||
Sbjct 1743452 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 1743511
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
|| ||||| || ||||| |||||||| ||| ||||
Sbjct 1743512 TTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGAT 1743546
>seq109
Length=1431625
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| || ||||||||| ||||| ||||| | || |||| ||||
Sbjct 625979 AGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCC 625920
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || |||||||||||||| |||||| | || | |||||||||||
Sbjct 625919 TCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 625860
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| || | || || |||
Sbjct 625859 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATCGTC 625800
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || ||||| |||||
Sbjct 625799 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768
Score = 102 bits (112), Expect = 5e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| |||| || || ||||| || || ||
Sbjct 870354 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 870295
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904
||||| ||| || |||||| | || | || |||||||| || | | || || ||||||
Sbjct 870294 GATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTGACGT 870236
Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
| |||| || | |||||| || | ||| || ||||| ||||| || ||||| |
Sbjct 870235 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAA 870176
Query 34965 CAAAGATCTGCAT 34977
| |||||||||||
Sbjct 870175 CGAAGATCTGCAT 870163
Score = 102 bits (112), Expect = 5e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| |||| || || ||||| || || ||
Sbjct 870582 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 870523
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904
||||| ||| || |||||| | || | || |||||||| || | | || || ||||||
Sbjct 870522 GATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTGACGT 870464
Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
| |||| || | |||||| || | ||| || ||||| ||||| || ||||| |
Sbjct 870463 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGA 870404
Query 34965 CAAAGATCTGCAT 34977
| |||||||||||
Sbjct 870403 CGAAGATCTGCAT 870391
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| |||| || || || || || || ||
Sbjct 625503 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 625444
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||||||||||| |||||| | || | |||||||| || | || || ||||||
Sbjct 625443 GATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 625384
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || || |||||| || | || || ||||| || || |||||||| ||
Sbjct 625383 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 625324
Query 34966 AAAGATCTGCAT 34977
||||| |||||
Sbjct 625323 GAAGATTTGCAT 625312
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| |||| || || || || || || ||
Sbjct 625731 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 625672
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||||||||||| |||||| | || | |||||||| || | || || ||||||
Sbjct 625671 GATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 625612
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || || |||||| || | || || ||||| || || |||||||| ||
Sbjct 625611 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 625552
Query 34966 AAAGATCTGCAT 34977
||||| |||||
Sbjct 625551 GAAGATTTGCAT 625540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692216500993
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |