Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq73 123 2e-23 seq65 118 7e-22 seq109 113 3e-20 >seq73 Length=1824528 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| || || | || |||| |||| Sbjct 212659 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCC 212718 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 212719 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 212778 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 212779 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 212838 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || |||||||||||||| |||||||| |||| Sbjct 212839 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 212869 >seq65 Length=1908199 Score = 118 bits (130), Expect = 7e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| |||||| || ||||| || || | || |||| |||| Sbjct 1743332 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCC 1743391 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 1743392 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 1743451 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 1743452 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 1743511 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || ||||| || ||||| |||||||| ||| |||| Sbjct 1743512 TTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGAT 1743546 >seq109 Length=1431625 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||||||||| ||||| ||||| | || |||| |||| Sbjct 625979 AGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCC 625920 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || |||||||||||||| |||||| | || | ||||||||||| Sbjct 625919 TCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 625860 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | || || ||| Sbjct 625859 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATCGTC 625800 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||| ||||| Sbjct 625799 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || ||||| || || || Sbjct 870354 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 870295 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| || |||||| | || | || |||||||| || | | || || |||||| Sbjct 870294 GATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTGACGT 870236 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | ||| || ||||| ||||| || ||||| | Sbjct 870235 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAA 870176 Query 34965 CAAAGATCTGCAT 34977 | ||||||||||| Sbjct 870175 CGAAGATCTGCAT 870163 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || ||||| || || || Sbjct 870582 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 870523 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| || |||||| | || | || |||||||| || | | || || |||||| Sbjct 870522 GATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTGACGT 870464 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | ||| || ||||| ||||| || ||||| | Sbjct 870463 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGA 870404 Query 34965 CAAAGATCTGCAT 34977 | ||||||||||| Sbjct 870403 CGAAGATCTGCAT 870391 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || || || || || || Sbjct 625503 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 625444 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||||||||| |||||| | || | |||||||| || | || || |||||| Sbjct 625443 GATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 625384 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 625383 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 625324 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 625323 GAAGATTTGCAT 625312 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || || || || || || Sbjct 625731 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 625672 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||||||||| |||||| | || | |||||||| || | || || |||||| Sbjct 625671 GATCAGTCGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 625612 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 625611 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 625552 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 625551 GAAGATTTGCAT 625540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692216500993