Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq73 93.3 1e-13 seq65 93.3 1e-13 seq109 91.5 3e-13 >seq73 Length=1824528 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || ||||| || || || ||||| | || || || || ||| Sbjct 212867 CAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGAC 212808 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || ||||| || ||| ||| ||| Sbjct 212807 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAA 212748 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| |||||| | || ||||| | ||| | |||||||||||| || Sbjct 212747 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAACATC 212688 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || ||||| || || ||| Sbjct 212687 CAAAAGGAGTCGACCCTCCAC 212667 >seq65 Length=1908199 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || || || |||||||| | || || || || ||| Sbjct 1743540 CAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 1743481 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || ||||| || ||| ||| ||| Sbjct 1743480 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAA 1743421 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| |||||| | || ||||| | ||| | |||||||||||| || Sbjct 1743420 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAACATC 1743361 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || ||||| || || ||| Sbjct 1743360 CAAAAGGAGTCGACCCTCCAC 1743340 >seq109 Length=1431625 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||||| || || || |||||||| | || || || || ||| Sbjct 870394 CAGATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCGGAC 870453 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || ||||| ||| || ||| || Sbjct 870454 ACGATTGACAACGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAACAG 870513 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| || || |||||| | || ||||| | || | |||||||||||| || Sbjct 870514 CGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATC 870573 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || || ||| | || ||| | || || Sbjct 870574 CAGAAGGAGTCGACGCTCCACTTGGTGTTGCGTCTCCG 870611 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || |||||||| | || || || || ||||| | || Sbjct 870178 AAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCGGACACGATTGACAAC 870237 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || ||||| ||| || ||| || || | ||||| Sbjct 870238 GTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAACAGCGATTGATCTTT 870297 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | || ||||| | || | |||||||||||| ||||||| ||||| Sbjct 870298 GCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATCCAGAAGGAGTCG 870357 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||| | || ||| | || || Sbjct 870358 ACGCTCCACTTGGTGTTGCGTCTCCG 870383 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||||| || || || |||||||| | || || || || ||||| | || Sbjct 870633 CAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCGGACACGATTGACAA 870692 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || ||||| ||| || ||| || || | ||||| Sbjct 870693 CGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAACAGCGATTGATCTT 870752 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| | || ||||| | || | |||||||||||| ||||||| ||||| Sbjct 870753 TGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATCCAGAAGGAGTC 870812 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 870813 GACGCTCCAC 870822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818574114387