Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq62 228 1e-53
seq60 102 1e-15
seq100 96.9 5e-14
seq73 91.5 2e-12
>seq62
Length=232403
Score = 228 bits (252), Expect = 1e-53
Identities = 284/388 (73%), Gaps = 17/388 (4%)
Strand=Plus/Minus
Query 259795 CGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGT 259854
||| || || ||| | |||||||||||||||||| ||||| |||| | |||| |
Sbjct 196805 CGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGG---TCACGACAT 196749
Query 259855 CGACAATGCGCTGGAGCACGTGCTCGCCACC-TACGAGGCCATGTCGCAGCAGTTGTTCA 259913
||| || ||| || || | | ||| | |||||| ||| | ||||
Sbjct 196748 CGA------------GCGCGT-CTTGCAATCGTACAACCTCATGTCTGAGCGCTACTTCA 196702
Query 259914 CCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCT 259973
|| || |||| || ||||| |||||||| ||||| | ||||||| ||||||||| |
Sbjct 196701 CCCACGCCTCGCCGACACTCTTCAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTT 196642
Query 259974 TTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCG 260033
| ||| | ||||||| |||||||| || |||||||| |||||||||||| |||||
Sbjct 196641 TCCTGGTCACGATGAAGGATGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCG 196582
Query 260034 CGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGG 260093
|||||||||||||| | ||||| || |||||||| | ||||| | ||||| | |
Sbjct 196581 CGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCG 196522
Query 260094 GCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTT 260153
|| ||||| | |||||||| |||||| | || |||||| | || |||||||| || || |
Sbjct 196521 GCTCCTACATCGCGGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCT 196462
Query 260154 TTAACGACACGGCGCGCTACGTCGACCA 260181
||| |||| |||||||||||||||||
Sbjct 196461 ACAACAACACCGCGCGCTACGTCGACCA 196434
Score = 89.7 bits (98), Expect = 7e-12
Identities = 168/242 (69%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 263172 CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCC-CAACCGGGTGACCATTGATA 263230
|||||||||||| ||| ||||||||| |||||| | | ||| | | | || |||
Sbjct 195062 CGATCTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACT-ATTATCGATC 195004
Query 263231 TGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCG 263290
|| ||||||| || | ||| |||||||| || ||||||||| | || | | ||
Sbjct 195003 TGTCGGCCGATCGAGGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTT-GTCG 194945
Query 263291 A-CCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAG 263349
| ||| ||| | | |||||||||||||| ||| | ||| || || || |||
Sbjct 194944 AGCCCAACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAG 194885
Query 263350 ACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGAT 263409
|| ||||||||||| ||||||| || |||| | | || || | || ||||||||
Sbjct 194884 ACGGGCATGTACTACTTGCGCACGCGCGCCGCCGTCGGTGCGATCAAGTTTACCGTCGAC 194825
Query 263410 CA 263411
||
Sbjct 194824 CA 194823
>seq60
Length=1146088
Score = 102 bits (112), Expect = 1e-15
Identities = 169/238 (71%), Gaps = 7/238 (3%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| |||| | |||| | |||| ||||||| ||||||||||||||||| ||| | |||
Sbjct 223643 GATCTGGGCACAGTACAAGAAAG-CCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACT 223701
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
| | || | | | |||||| ||| | |||||||||| | ||||||
Sbjct 223702 TGTCCAAGGATATGCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCT 223761
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||||||||||||| |||||||||||| ||| |||||||| ||||||| ||| ||
Sbjct 223762 CGCACGTCCTCGCC-TTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAG 223820
Query 1455952 CGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
|| || | || |||||||| | | ||||| || | || ||||| || || |||
Sbjct 223821 CGATTCTCTG-GTGAGGTCCAGTCAGCCGAGGCTCGATGCTTCTACGGTTTTCAAATC 223877
>seq100
Length=1849583
Score = 96.9 bits (106), Expect = 5e-14
Identities = 136/189 (72%), Gaps = 8/189 (4%)
Strand=Plus/Plus
Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017
||| |||||| | ||| ||| | |||||||| ||||||||||| |||| || |||
Sbjct 201985 CTCGAACAAGGCGATGCTCATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGTATCTC 202044
Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCT-CCAACAAGCGCAAC---ACGATCGGCACGCGCG 725073
| |||||| || || ||| || |||| | ||| |||||| | ||||||
Sbjct 202045 CCTCGAGGCTT----CCAAGCTCGCGACCTACAACCACAAGGCGACGATCTCCTCGCGCG 202100
Query 725074 AGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCG 725133
||||||||||| | || ||| ||||| | | || ||| || ||| ||||||| |||| |
Sbjct 202101 AGATCCAGACCTCGGTTCGCTTGATCCTCCCTGGAGAATTGTCCAAGCACGCCATCTCGG 202160
Query 725134 AGGGCACCA 725142
| |||||||
Sbjct 202161 AAGGCACCA 202169
Score = 96.9 bits (106), Expect = 5e-14
Identities = 162/229 (71%), Gaps = 14/229 (6%)
Strand=Plus/Minus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||||||| | ||||| || |||||| |||| | ||| || |||||| | |||
Sbjct 520291 CAAGGTGTTGAAGCAAGTCCACCCCGACACCGGT-----ATC-TCGAACAAGGCGATGCT 520238
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035
|||| | |||||||| ||||||||||| | || |||||| | ||| || ||| |
Sbjct 520237 GATCCTCAACTCGTTCGTCAACGACATCTTTGAGCGCATCACCCTCGAAGC--GTC--CA 520182
Query 725036 GGCGCGCT-CCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTGC 725091
|| ||| || |||| | ||| ||| | | || ||||||||||||||| | || |
Sbjct 520181 AGCTCGCGACCTACAACCACAAGGCGACCATCTCGTCGCGCGAGATCCAGACCTCGGTCC 520122
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
| ||||| | | ||| || ||| ||| ||||||| |||| || |||||
Sbjct 520121 GATTGATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCGGAAGGCAC 520073
Score = 96.9 bits (106), Expect = 5e-14
Identities = 162/229 (71%), Gaps = 14/229 (6%)
Strand=Plus/Plus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||||||| | ||||| || |||||| |||| | ||| || |||||| | |||
Sbjct 1291829 CAAGGTGTTGAAGCAAGTCCACCCCGACACCGGT-----ATC-TCGAACAAGGCGATGCT 1291882
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035
|||| | |||||||| ||||||||||| | || |||||| | ||| || ||| |
Sbjct 1291883 GATCCTCAACTCGTTCGTCAACGACATCTTTGAGCGCATCACCCTCGAAGC--GTC--CA 1291938
Query 725036 GGCGCGCT-CCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTGC 725091
|| ||| || |||| | ||| ||| | | || ||||||||||||||| | || |
Sbjct 1291939 AGCTCGCGACCTACAACCACAAGGCGACCATCTCGTCGCGCGAGATCCAGACCTCGGTCC 1291998
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
| ||||| | | ||| || ||| ||| ||||||| |||| || |||||
Sbjct 1291999 GATTGATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCGGAAGGCAC 1292047
>seq73
Length=1824528
Score = 91.5 bits (100), Expect = 2e-12
Identities = 167/241 (69%), Gaps = 13/241 (5%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| |||| |||||| || ||| || || | ||||||||| ||||||| ||| ||||||
Sbjct 1428203 GATTTGGGCCATGTACAAACAAGCCCAAG-CGTCCTTTTGGTCCGCCGAAGAGATCGACC 1428261
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC-------GCTGAGCGACGACGAGCGCCATTTC 1455887
||||| |||| ||||| | || | ||| | | ||||||| ||| | ||
Sbjct 1428262 TCGGCAACGAC---CTCCAC-GACTGGCACCACAAGCTCAACAACGACGAACGCTACTTT 1428317
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| ||||| |||||| || |||||||| ||||| ||||| ||||| ||||
Sbjct 1428318 ATCGCCCACGTGCTCGCC-TTCTTCGCCGCTTCGGATGGGGTCGTGAATGAGAATCTGGT 1428376
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| | || || ||||| || || | ||||| | | ||||| ||||| |||||
Sbjct 1428377 CGAGAGGTTCTCGAGCGAGGTGCAGTTCGCCGAGGCGAGGTGCTTTTATGGGTTTCAGAT 1428436
Query 1456008 C 1456008
|
Sbjct 1428437 C 1428437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177797021579814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |