Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq75 158 2e-33
seq60 113 6e-20
>seq75
Length=589559
Score = 158 bits (174), Expect = 2e-33
Identities = 275/395 (70%), Gaps = 4/395 (1%)
Strand=Plus/Plus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| |||||||| | || ||| ||| || ||||| ||| | || |||
Sbjct 48495 CCGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 48554
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| ||||||||||| || ||| ||||||||| | ||| | || ||
Sbjct 48555 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 48614
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| ||||| ||| |||||| ||| ||| | |||||
Sbjct 48615 GATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAA 48674
Query 9335 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 9392
||| || || ||| | || ||| ||| |||||| || | |||||| | |||| | | ||
Sbjct 48675 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATCTCCCGA-GCTGTC 48732
Query 9393 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 9452
| ||| | ||| || |||| | | | | | || || || | || || |
Sbjct 48733 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 48792
Query 9453 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 9512
|||||||| |||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 48793 GATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACC 48852
Query 9513 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 9547
||||||| | ||| | || ||||||||||||||
Sbjct 48853 CCCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 48887
>seq60
Length=1146088
Score = 113 bits (124), Expect = 6e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| || ||||| |||| ||| ||| || ||||| ||| | || ||
Sbjct 407718 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 407777
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 407778 CGAGACGACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 407837
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| |||| ||| |||||| ||| |||||||||||
Sbjct 407838 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 407897
Query 9335 CCATGAATCACC 9346
||| || || ||
Sbjct 407898 CCACGAGTCCCC 407909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030845991200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |