Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq62 179 5e-40
>seq62
Length=232403
Score = 179 bits (198), Expect = 5e-40
Identities = 552/847 (65%), Gaps = 9/847 (1%)
Strand=Plus/Plus
Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769
||||| || |||| || || || | | ||| ||| | | |||||| || || ||
Sbjct 195948 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 196007
Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829
||||||| ||| || ||| || ||||| | ||||||||| || || ||| ||||
Sbjct 196008 GTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCG 196067
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
|| || ||||| |||||| | || | || || || |||| | ||||| || | |
Sbjct 196068 GCGTCTTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 196127
Query 118890 CAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949
|| | | || || | || ||||| || ||||| | ||||| ||| | |
Sbjct 196128 CAAAGTTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTTTCGAAC 196187
Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 119009
| ||| |||||||| || | | || ||| || || || | | | |||||||||
Sbjct 196188 AAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAG 196247
Query 119010 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069
|| | ||| | || | |||| || |||| ||| || || || || |||||||||||
Sbjct 196248 AGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCA 196307
Query 119070 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129
|||||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 196308 AAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAAC 196367
Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 119186
|| | || || |||||||| || || ||||| | ||||| | || |||
Sbjct 196368 TCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 196427
Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246
||| | |||| || || | ||| ||| ||| | ||||| ||||| || | ||| ||
Sbjct 196428 CCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCG 196487
Query 119247 TCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGT 119304
| || | ||| || || ||| ||| || ||| | | || | || | |||||||
Sbjct 196488 TTCGAGTAGCCGTTCGTGCCCGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATGC 196545
Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364
|| ||| ||||| || || ||| ||||| |||||||| | |||| || ||||||
Sbjct 196546 TCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGA 196605
Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424
| || || ||||| ||| |||| | | || ||||| || ||| | || || |
Sbjct 196606 TGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAG 196665
Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGT 119484
| || || || |||||||| || || | |||||| |||| | | ||||| ||
Sbjct 196666 GCGTTCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGT 196725
Query 119485 CGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543
||| | | ||||||| || | ||||| | || || || || | | ||| |||||
Sbjct 196726 TGTACGATTGCAAGACGCGCTCG-ATGTCGTGACCATGGATGCCAACGGCGACACGCATG 196784
Query 119544 AACATGT 119550
| |||||
Sbjct 196785 AGCATGT 196791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434063625320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |