Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq75 165 9e-36
seq73 131 2e-25
seq62 131 2e-25
seq60 114 2e-20
>seq75
Length=589559
Score = 165 bits (182), Expect = 9e-36
Identities = 276/394 (70%), Gaps = 4/394 (1%)
Strand=Plus/Plus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||||||||| ||||| ||| ||| || || ||| || || || ||| |
Sbjct 48496 CGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCC 48555
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
||| ||| ||||||||||| || ||| ||||||||| | ||| | || |||
Sbjct 48556 GAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGG 48615
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| ||||| ||| |||||| ||| ||| | ||||||
Sbjct 48616 ATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAAC 48675
Query 7412 CATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT-TACCGAGGGTATCA 7469
|| || || ||| | || ||| ||| ||||||||| | |||||| | |||| | | ||
Sbjct 48676 CACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATCTCCCGA-GCTGTCG 48733
Query 7470 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAG 7529
| ||| | ||| || |||| | | | | | || || || | || | | |
Sbjct 48734 CCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTG 48793
Query 7530 ATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAG 7589
||||||| |||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 48794 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 48853
Query 7590 CCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7623
||||||| | ||| | || ||||||||||||||
Sbjct 48854 CCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 48887
>seq73
Length=1824528
Score = 131 bits (144), Expect = 2e-25
Identities = 236/337 (70%), Gaps = 10/337 (3%)
Strand=Plus/Plus
Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 1166331 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 1166390
Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279
|| || || ||| | || || || | || ||||| || ||||||||||||
Sbjct 1166391 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATC 1166450
Query 169280 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTG-AGCTGTGTGACAGAGGCATCGCGA 169336
| ||||| ||| ||||| ||| || ||| | | || | || | | || || ||
Sbjct 1166451 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGC 1166507
Query 169337 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAG 169396
|| || |||| || || | |||||||||||| |||| || ||||| ||||| |
Sbjct 1166508 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 1166567
Query 169397 AGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTT- 169455
||||||| ||| ||||| | ||| || || || || ||||| | ||||||||| || ||
Sbjct 1166568 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTG 1166627
Query 169456 -TCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 169491
|| | | | |||||| || ||||||||||| ||
Sbjct 1166628 GACCCGTTCCT--CGTACCAGCGTTGTTCGCATCTTC 1166662
>seq62
Length=232403
Score = 131 bits (144), Expect = 2e-25
Identities = 516/806 (64%), Gaps = 17/806 (2%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||| ||| ||||| ||||||| || ||| | || || ||||| | ||||| || ||
Sbjct 196799 CCCGCAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGTCACGACATCGAGCGCGT 196740
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
|||| | | ||| || ||||| | | |||| ||||| | || || |||||
Sbjct 196739 CTTGCAATCGTACAACCTCATGTCTGAGCGCTACTTCACCCACGCCTCGCCGACACTCTT 196680
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|||||| || || || || || | || || ||||| || | | ||||| ||
Sbjct 196679 CAATGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACGATGAAGGATGA 196620
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
|| || | || ||||| | || || | | ||| |||| ||||| ||| || ||
Sbjct 196619 TTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 196560
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518
||||| || || |||||| | | | || | ||| || ||| ||| ||
Sbjct 196559 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCGGGCACG 196502
Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
|| || | || | || || | || ||||| || || | ||| ||| ||||||||
Sbjct 196501 AACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 196442
Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632
|| | |||| ||| ||||| ||| | |||| |||| || |||||||||
Sbjct 196441 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGG 196385
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGC 104690
||||| || || | |||||||| || | || ||||| || | ||||| | |||
Sbjct 196384 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCATGGCAAGGAGGAAGTCCGC 196325
Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| | || |||||||||| || ||||||||||| ||||| || ||| || | || ||||
Sbjct 196324 GCT--CGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGG 196267
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
||| | ||| | ||||| || || | | || || || ||| ||| | | |
Sbjct 196266 CCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATG 196207
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870
| || ||||| ||| | | | ||| ||||| | || || || || | ||||
Sbjct 196206 GCGAAGAGTTCCGCGCCTTGTTCGAAAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA 196147
Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| || || | | ||| | || ||||| | | || ||| ||||| | || |
Sbjct 196146 TCCCCGCGCAAAAACTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCCT 196087
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||| |||||||||||| ||| |||| || |||||||| | || |||||
Sbjct 196086 TCATGCTCTACAAAGACGCCGCGAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCA 196027
Query 104991 AGAGTTCCAATCTCTGTACAGAAATC 105016
|| || || || || || || |||
Sbjct 196026 AGTCGTCGAACCTGTGCACCGAGATC 196001
>seq60
Length=1146088
Score = 114 bits (126), Expect = 2e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||| ||||| || |||||| ||| || || ||| || || || || |
Sbjct 407719 CGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCC 407778
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
||| ||| ||||||||||| |||||| |||||||||| | ||| | || |||
Sbjct 407779 GAGACGACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGG 407838
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| |||| ||| |||||| ||| ||||||||||||
Sbjct 407839 ATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAAC 407898
Query 7412 CATGAATCACC 7422
|| || || ||
Sbjct 407899 CACGAGTCCCC 407909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259728258280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |