Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq60 82.4 7e-11 >seq60 Length=1146088 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 6895 CCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC 6954 || |||||| || || || || |||||||||||||| || ||||| ||||| || ||||| Sbjct 347658 CCTATACTCTGCGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTC 347717 Query 6955 CTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGAT 7014 |||| | ||||| |||||||||||| | || || || | | ||||| || Sbjct 347718 TTCCCTATGCCCCAACCCAACCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAAT 347777 Query 7015 CTTCACCCCC 7024 ||| |||||| Sbjct 347778 CTTGACCCCC 347787 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCC 34380 |||||| ||||| ||||| | | || || || | |||||||||||| ||||| Sbjct 347787 GGGGGTCAAGATTTGGGATGGGAATGGATCGAGACAGTTTCTGGACAAGGTTGGGTTGGG 347728 Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 | |||| ||||| || ||||| ||||| || |||||||||||||| || || || || Sbjct 347727 GCATAGGGAAGAGGGGGATTTGGGACCGGTTTATGGGTTCCAGTGGAGGCATTTCGGCGC 347668 Query 34441 GGAGTATCGG 34450 |||||| || Sbjct 347667 AGAGTATAGG 347658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261576317840