Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq60 82.4 7e-11
>seq60
Length=1146088
Score = 82.4 bits (90), Expect = 7e-11
Identities = 96/130 (74%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 6895 CCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC 6954
|| |||||| || || || || |||||||||||||| || ||||| ||||| || |||||
Sbjct 347658 CCTATACTCTGCGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTC 347717
Query 6955 CTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGAT 7014
|||| | ||||| |||||||||||| | || || || | | ||||| ||
Sbjct 347718 TTCCCTATGCCCCAACCCAACCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAAT 347777
Query 7015 CTTCACCCCC 7024
||| ||||||
Sbjct 347778 CTTGACCCCC 347787
Score = 82.4 bits (90), Expect = 7e-11
Identities = 96/130 (74%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCC 34380
|||||| ||||| ||||| | | || || || | |||||||||||| |||||
Sbjct 347787 GGGGGTCAAGATTTGGGATGGGAATGGATCGAGACAGTTTCTGGACAAGGTTGGGTTGGG 347728
Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440
| |||| ||||| || ||||| ||||| || |||||||||||||| || || || ||
Sbjct 347727 GCATAGGGAAGAGGGGGATTTGGGACCGGTTTATGGGTTCCAGTGGAGGCATTTCGGCGC 347668
Query 34441 GGAGTATCGG 34450
|||||| ||
Sbjct 347667 AGAGTATAGG 347658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261576317840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |