Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq60 143 2e-29 >seq60 Length=1146088 Score = 143 bits (158), Expect = 2e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||||||||||||||||||||| || |||||||||| || ||||||||||| ||| | | Sbjct 347672 CGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGCCCCA 347731 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | || |||||||| ||| | ||| || || || | ||||| ||||| |||||||| | Sbjct 347732 ACCCAACCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTGT 347791 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 |||| | ||| || | || || |||| |||||||| ||||| ||||| | || Sbjct 347792 CGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCGATGATAC 347851 Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | | ||||||| ||||||| || | ||||| Sbjct 347852 CTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 347885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162472333242