Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq109 147 2e-30
seq73 143 2e-29
seq65 140 2e-28
>seq109
Length=1431625
Score = 147 bits (162), Expect = 2e-30
Identities = 173/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| ||||| | || | |||||||| ||| ||||| |||||| |||||||||||
Sbjct 870624 TTGCATACCCCCACGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTA 870565
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||| | || || |||||||| || ||||||||||| ||||| || ||
Sbjct 870564 ATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTC 870505
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | |||||||| || ||||| ||| | | | || ||||| | ||
Sbjct 870504 TGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGA 870445
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || |||||||| ||||| || ||||| |||||||| |||||
Sbjct 870444 CTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 870391
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
||||| | || | || ||||| ||| ||||| |||||| ||||||||||||||||||
Sbjct 870845 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 870786
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || || |||||||| || ||||||||||| ||||| || |||| ||
Sbjct 870785 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 870726
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| || ||||| ||| | | | || ||||| | || || |||
Sbjct 870725 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 870666
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || |||||||| ||||| || ||||| ||||||||||||||
Sbjct 870665 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 870619
Score = 141 bits (156), Expect = 7e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | |||||||| ||| ||||| |||||| ||||||||||||||
Sbjct 870393 CATACCACCGCGGAGACGCAACACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATC 870334
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| ||| | || || |||||||| || ||||||||||| ||||| || ||||
Sbjct 870333 GGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGG 870274
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| || ||||| ||| | | | || ||||| | || ||
Sbjct 870273 GGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTC 870214
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || |||||||| ||||| || ||||| |||||||| |||||
Sbjct 870213 GACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTAACGAAGATCTGCAT 870163
Score = 138 bits (152), Expect = 8e-28
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| |||||||||||
Sbjct 625317 TTGCATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTA 625258
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||| | || || |||||||| || || |||||||| || || || ||
Sbjct 625257 ATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGTTGGTC 625198
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| ||| ||||| ||| | | | || ||||| | |||
Sbjct 625197 TGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGA 625138
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | ||| |||||||| || || |||||||| ||||| ||||||||
Sbjct 625137 CTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 625084
Score = 138 bits (152), Expect = 8e-28
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| |||||||||||
Sbjct 625545 TTGCATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTA 625486
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||| | || || ||||| || || |||||||||| || || || ||
Sbjct 625485 ATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTC 625426
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| ||| ||||| ||| | | | || ||||| | |||
Sbjct 625425 TGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGA 625366
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 625365 CTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625312
Score = 138 bits (152), Expect = 8e-28
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| |||||||||||
Sbjct 625773 TTGCATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTA 625714
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||| | || || ||||| || || |||||||||| || || || ||
Sbjct 625713 ATCGGCGAGCGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATCAGTCGTTGTTGGTC 625654
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| ||| ||||| ||| | | | || ||||| | |||
Sbjct 625653 TGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGA 625594
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 625593 CTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625540
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| |||| || | | ||||| ||||||||| |||||| ||||||||||| |||||
Sbjct 625995 TCCGCCTCGGAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 625936
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
||| ||| | || || |||||||| || |||||||||| || || || |||| ||
Sbjct 625935 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGTTGTTGGTCTGGGGG 625876
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| || ||||| ||| ||||| ||| | | | || ||||| | || || ||
Sbjct 625875 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGAC 625816
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 625815 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 625768
>seq73
Length=1824528
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || ||||||||||||||||||||||||||| ||| | || ||
Sbjct 212661 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCTC 212720
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||| | ||| ||||| |||| || | |||||||| ||
Sbjct 212721 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTG 212780
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||||| || || ||||| | || || |||||
Sbjct 212781 GATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 212840
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
|||||||||||||| || ||||||||||
Sbjct 212841 GCCCGTGAGGGTCTTGACAAAGATTTGCA 212869
>seq65
Length=1908199
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || ||||||||||||||||||||||||||| ||| | || ||
Sbjct 1743335 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGAGTGCGGCCATCCTCG 1743394
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | ||| ||||| |||| || | |||||||| ||
Sbjct 1743395 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 1743454
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||||| || || ||||| | || ||||||||
Sbjct 1743455 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 1743514
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
||||| || ||||| || ||||||||| ||||
Sbjct 1743515 CCCGTAAGAGTCTTGACAAAGATTTGCCTGAT 1743546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989755054699
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |