Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq190 113 5e-20 seq185 113 5e-20 seq191 86.0 7e-12 >seq190 Length=701213 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| |||| ||| || || | || || |||||||| || || || Sbjct 552021 CTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCGAGCTGCTTTCCCGCAAA 551962 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || ||||||||| ||| || |||| | Sbjct 551961 GATGAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 551902 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||| || || |||| |||||||| ||||| || | ||||| || Sbjct 551901 GTCGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGAC 551842 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 551841 GAAGATCTGCAT 551830 Score = 113 bits (124), Expect = 5e-20 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||| | |||| ||||||||||| || || ||||| || | ||||| || | Sbjct 552501 ACGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 552442 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || || || ||||| ||||||||||| | || | | |||||| Sbjct 552441 ATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTT 552382 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 |||| ||| | || | |||| ||| | | | |||||| ||| || || |||| ||| Sbjct 552381 GTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTG 552324 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || |||||||| || || || ||||| Sbjct 552323 ATCGTCTTTCCAGTGAGCGTCTTGACGAAAATCTGCAT 552286 Score = 109 bits (120), Expect = 6e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | || || || | || || |||||||| || ||||| Sbjct 551792 TCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCATCCTCGAGCTGCTTTCCTGCGAAA 551733 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||||| || | | |||||| ||| ||| || |||| ||| Sbjct 551732 ATGAGACGCTGCTGGTCGGGAGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGA-CGTT 551674 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| ||| ||||| |||| |||||||| ||||| || || ||||| || Sbjct 551673 GTCGATAGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGAC 551614 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 551613 AAAGATCTGCAT 551602 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| || | ||| || || | || || || ||||| || Sbjct 552254 GTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCATCTTCGAGTTGCTTGCCG 552195 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| || | |||||||||||| | || | || |||||||||| ||| || || Sbjct 552194 GCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 552135 Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 | | | | || ||| || || || || | ||||||||| ||||| || | ||| Sbjct 552134 ACATTGTCAATGGTATCGGAAGACTCGACTTCCAGCGTGATGGTCTTGCCAGTCAAGGTC 552075 Query 43167 TTTACAAAGATTTGCAT 43183 || || || || ||||| Sbjct 552074 TTGACGAAAATCTGCAT 552058 >seq185 Length=548418 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || ||||||||||| ||||| Sbjct 282503 CTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 282444 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 282443 GATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 282385 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | |||||||| || ||||| || ||||| | Sbjct 282384 TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTAAGGGTCTTGA 282325 Query 43171 CAAAGATTTGCATTTT 43186 ||||||| ||||| || Sbjct 282324 CAAAGATCTGCATCTT 282309 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || || || Sbjct 360626 CTCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 360685 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || |||| ||| Sbjct 360686 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 360744 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || |||| ||||| || |||||||| |||||||| | Sbjct 360745 TGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTCAGCGTCTTGA 360804 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 360805 CGAAGATCTGCAT 360817 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | |||||| || | || || |||||||| || || || Sbjct 360854 CTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 360913 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 360914 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 360973 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || || || || || |||| |||||||||||||| || || ||||| || Sbjct 360974 GTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCAGTGAGAGTCTTGAC 361033 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 361034 AAAGATCTGCAT 361045 >seq191 Length=731470 Score = 86.0 bits (94), Expect = 7e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 493834 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 493775 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 493774 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 493716 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | ||||| || ||||| || | |||||||| || || || Sbjct 493715 TGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTCTTACCTGT 493667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816191899160