Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq185 122 7e-23 seq190 109 4e-19 >seq185 Length=548418 Score = 122 bits (134), Expect = 7e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| ||| ||| |||| || || || Sbjct 360614 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCGAGCTG 360673 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | ||||| |||||||| || | ||||||||||||| || || Sbjct 360674 CTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTT 360733 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| ||| ||||| | ||| |||||||||||||| Sbjct 360734 GGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 360793 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||| ||||| || ||||| |||||| Sbjct 360794 CAGCGTCTTGACGAAGATCTGCATG 360818 Score = 105 bits (116), Expect = 5e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || ||| |||| || || || || |||||||| Sbjct 282503 CTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 282444 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 282443 GATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 282384 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| | ||||||||| | ||| || ||||| ||||| || ||||| || Sbjct 282383 GTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTAAGGGTCTTGAC 282324 Query 45325 AAAGATTTGCATGTTG 45340 |||||| ||||| ||| Sbjct 282323 AAAGATCTGCATCTTG 282308 >seq190 Length=701213 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||||||||||||||| |||||||||||| ||| ||| | || || ||||| Sbjct 552260 TGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCATCTTCGAGTTGC 552201 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| ||||| ||||| ||||| || || | |||||||||||| || || Sbjct 552200 TTGCCGGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 552141 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | | || | ||| || |||| || || |||||||| ||| Sbjct 552140 GCCTTCACATTGTCAATGGTATCGGAAGACTCGACTTCCAGCGTGATGGTCTTGCCAGTC 552081 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || || || ||||| Sbjct 552080 AAGGTCTTGACGAAAATCTGCAT 552058 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||||||||||||||| ||||||||||| || ||| | || || || || Sbjct 552489 GTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTG 552430 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | ||||| ||||| ||||| | ||||||||||||| ||| || Sbjct 552429 CTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTT 552370 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||| | || |||||||| || || Sbjct 552369 GGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTTCCAGT 552310 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || || ||||| Sbjct 552309 GAGCGTCTTGACGAAAATCTGCAT 552286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074251449137