Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq166 102 1e-16 >seq166 Length=36299 Score = 102 bits (112), Expect = 1e-16 Identities = 170/245 (69%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| || |||||||| | || | ||||| || || ||||| Sbjct 24060 CACGCAAAGTCGGTGTGAAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 24001 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||| ||||| || ||||| || |||||||| || || ||||| || ||| Sbjct 24000 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAACGAGCCGGAGAAAAAG 23941 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGT 33758 || || || || || |||||||| | || | ||| | || ||||| ||| Sbjct 23940 ATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCGGCGAAAGTGGCGCGACGGTCGCTG 23881 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| | ||||| ||||||||||| || || || || || || | ||| | | Sbjct 23880 ATCCAGCGGAGCGCCCAGTCGGCCTTCTTCTTGACGACGGGGATGGTCTCGACGGCGTCA 23821 Query 33819 AAGAG 33823 ||||| Sbjct 23820 AAGAG 23816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816049074160