Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq166 98.7 1e-15 >seq166 Length=36299 Score = 98.7 bits (108), Expect = 1e-15 Identities = 169/245 (69%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| || |||||||| | || | |||||||| || ||||| Sbjct 24060 CACGCAAAGTCGGTGTGAAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 24001 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| ||||| ||||| || ||||| || ||||| ||||| || || || || || Sbjct 24000 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAACGAGCCGGAGAAAAAG 23941 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---ACTGTCATGT 36334 || || || || || |||||||| | || | ||| | || ||| || ||| Sbjct 23940 ATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCGGCGAAAGTGGCGCGACGGTCGCTG 23881 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 ||||| | ||||| ||||||||||| || || || || ||||| | || | | Sbjct 23880 ATCCAGCGGAGCGCCCAGTCGGCCTTCTTCTTGACGACGGGGATGGTCTCGACGGCGTCA 23821 Query 36395 AAGAG 36399 ||||| Sbjct 23820 AAGAG 23816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171179249480