Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq165 104 2e-17 seq153 104 2e-17 >seq165 Length=35993 Score = 104 bits (114), Expect = 2e-17 Identities = 111/144 (77%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 33575 AGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 ||| ||||||||||||||| ||| |||||| ||| ||||| ||| ||||| |||||| Sbjct 941 AGACGGGCGACAAGTTTGCCTCGCGTCACGG-CCAAAAGGGAACGGTGGGCATCATGTAC 999 Query 33634 GACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCG 33693 ||| |||||||||||| |||| || ||| | |||||| | ||||||||||| Sbjct 1000 CGGCAGGAGGACATGCCGTTTTCGGCGGAGGGCATCACGCCGGACATTATCATCAACCCG 1059 Query 33694 CATGCGTTCCCCTCGCGCATGACG 33717 || ||| | || ||||| |||||| Sbjct 1060 CACGCGATTCCGTCGCGAATGACG 1083 >seq153 Length=23853 Score = 104 bits (114), Expect = 2e-17 Identities = 111/144 (77%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 33575 AGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 ||| ||||||||||||||| ||| |||||||| | ||||| ||| ||||| |||||| Sbjct 12147 AGACGGGCGACAAGTTTGCCTCGCGTCACGGCCAA-AAGGGAACGGTGGGCATCATGTAC 12089 Query 33634 GACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCG 33693 ||| |||||||||||| |||| || ||| | |||||| | ||||||||||| Sbjct 12088 CGGCAGGAGGACATGCCGTTTTCGGCGGAGGGCATCACGCCGGACATTATCATCAACCCG 12029 Query 33694 CATGCGTTCCCCTCGCGCATGACG 33717 || ||| | || ||||| |||||| Sbjct 12028 CACGCGATTCCGTCGCGAATGACG 12005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232744705391