Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq190 109 5e-19 seq166 86.0 6e-12 >seq190 Length=701213 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| || | ||| | || ||||| || |||||||| || || | Sbjct 552056 CCACCGCGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAC 551997 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||||||||| || || ||| |||| || || ||||| |||||||| Sbjct 551996 AGGGTGCGGCCATCTTCGAGCTGCTTTCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGA 551937 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 551936 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACC 551877 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||||||||| || || ||||| || |||||| Sbjct 551876 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 551829 >seq166 Length=36299 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 52606 GCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGT 52665 |||||||| ||||| || |||||||| ||||| || || || | ||||| || || Sbjct 23894 GCCACTTTCGCCGAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCCGGC 23953 Query 52666 AGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGC 52725 ||||| | || || | |||| | ||| | |||||||||||||| || | Sbjct 23954 TCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCC 24013 Query 52726 AACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTG 52772 |||||| | || ||||||||||| || | ||||| || |||||||| Sbjct 24014 AACGAGCTCATCTCGCGCGACGAGGGCCTTCACACCGACTTTGCGTG 24060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062778442400