Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08-
21] 197 sequences; 18,111,965 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq69 140 2e-28
seq182 114 9e-21
seq194 104 2e-17
seq190 93.3 3e-14
>seq69
Length=4587
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 716 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 775
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 776 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 810
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 2724 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 2783
Query 20007 GGTAATATTTAGCCTTA 20023
||||||||||||||
Sbjct 2784 CCCAATATTTAGCCTTA 2800
>seq182
Length=489945
Score = 114 bits (126), Expect = 9e-21
Identities = 202/292 (69%), Gaps = 2/292 (1%)
Strand=Plus/Minus
Query 6200 GTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTAT 6259
||||||||||||| ||||| | | || ||||| | ||||| ||||| ||||| ||
Sbjct 167270 GTTCTACCGCTACCGCATGCCCCTCCTCCAGACCAAGATTGAGGGCAAGGGCAACGGCAT 167211
Query 6260 TAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTA 6319
|| |||||||| ||||||| | || |||| | ||| | |||||| || ||||
Sbjct 167210 CAAGACCGTCATCCCCAACATGTCCGACATCGCCCGTTCCCTCAGCCGCCCTCCCGCCTA 167151
Query 6320 CCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCA-GACGCAGTTTGATCACAAAAACG 6378
|||||| || | ||||| || || || ||||| || | | | | || |||| | ||
Sbjct 167150 CCCGACCAAGTTCTTCGGCTGTGAGCTCGGCGCACAGGTCTCCG-CCGACGACAAGACCG 167092
Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438
| |||| |||||| ||||| | || || | | | |||| || | || |||||||
Sbjct 167091 ACCGCTACATCGTCAACGGCGCACACGACGCCGACCGTCTGCGCGAGCTCCTCGACGGCT 167032
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490
| || |||||| || || || | || ||| | ||||| || ||||| ||
Sbjct 167031 TCATCGACAAGTTCGTCCTCTGCGGCGACTGCAAGAACCCCGAAACCGACCT 166980
>seq194
Length=976279
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 254 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 313
Query 20007 GGTAATATTTAGCCTTA 20023
||||||||||||||
Sbjct 314 CCCAATATTTAGCCTTA 330
>seq190
Length=701213
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173
|||||| ||||||||||| || || ||||| || |||| ||| | || || | |||
Sbjct 552261 ATGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCATCTTCGAGTTG 552202
Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233
|| ||||| || || | || || || || | ||||| ||| || |||||| || ||
Sbjct 552201 CTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 552142
Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293
||||||||| | | ||||| | || ||||| | || || || || || ||
Sbjct 552141 GGCCTTCACATTGTCAATGGTATCGGAAGACTCGACTTCCAGCGTGATGGTCTTGCCAGT 552082
Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317
|||||| || ||||| ||||||||
Sbjct 552081 CAAGGTCTTGACGAAAATCTGCAT 552058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946395812707
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |