Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq69 140 2e-28 seq182 114 9e-21 seq194 104 2e-17 seq190 93.3 3e-14 >seq69 Length=4587 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 716 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 775 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 776 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 810 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 2724 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 2783 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||||||| Sbjct 2784 CCCAATATTTAGCCTTA 2800 >seq182 Length=489945 Score = 114 bits (126), Expect = 9e-21 Identities = 202/292 (69%), Gaps = 2/292 (1%) Strand=Plus/Minus Query 6200 GTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTAT 6259 ||||||||||||| ||||| | | || ||||| | ||||| ||||| ||||| || Sbjct 167270 GTTCTACCGCTACCGCATGCCCCTCCTCCAGACCAAGATTGAGGGCAAGGGCAACGGCAT 167211 Query 6260 TAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTA 6319 || |||||||| ||||||| | || |||| | ||| | |||||| || |||| Sbjct 167210 CAAGACCGTCATCCCCAACATGTCCGACATCGCCCGTTCCCTCAGCCGCCCTCCCGCCTA 167151 Query 6320 CCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCA-GACGCAGTTTGATCACAAAAACG 6378 |||||| || | ||||| || || || ||||| || | | | | || |||| | || Sbjct 167150 CCCGACCAAGTTCTTCGGCTGTGAGCTCGGCGCACAGGTCTCCG-CCGACGACAAGACCG 167092 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | |||| |||||| ||||| | || || | | | |||| || | || ||||||| Sbjct 167091 ACCGCTACATCGTCAACGGCGCACACGACGCCGACCGTCTGCGCGAGCTCCTCGACGGCT 167032 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 | || |||||| || || || | || ||| | ||||| || ||||| || Sbjct 167031 TCATCGACAAGTTCGTCCTCTGCGGCGACTGCAAGAACCCCGAAACCGACCT 166980 >seq194 Length=976279 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 254 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 313 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||||||| Sbjct 314 CCCAATATTTAGCCTTA 330 >seq190 Length=701213 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| ||||||||||| || || ||||| || |||| ||| | || || | ||| Sbjct 552261 ATGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCATCTTCGAGTTG 552202 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || ||||| || || | || || || || | ||||| ||| || |||||| || || Sbjct 552201 CTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 552142 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||||||||| | | ||||| | || ||||| | || || || || || || Sbjct 552141 GGCCTTCACATTGTCAATGGTATCGGAAGACTCGACTTCCAGCGTGATGGTCTTGCCAGT 552082 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 |||||| || ||||| |||||||| Sbjct 552081 CAAGGTCTTGACGAAAATCTGCAT 552058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946395812707