Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08-
21] 197 sequences; 18,111,965 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq185 100 2e-16
seq190 96.9 3e-15
>seq185
Length=548418
Score = 100 bits (110), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| ||||| || ||||| |||||| | || || ||| ||||||| |||| || |||||
Sbjct 361048 ACCATGCAGATCTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTCGAGGTCGAGTCC 360989
Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|| || || || || || || ||| || ||| ||||| || || ||||| || |
Sbjct 360988 TCGGATACCATTGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCCG 360931
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||| ||||| | || ||||||||||| || | || |||| |||||| || || |
Sbjct 360930 ACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCGGACT 360871
Query 25174 ACAATATTCAAAAAGAATCCACGCTACA 25201
|||| || || || || || || || ||
Sbjct 360870 ACAACATCCAGAAGGAGTCTACTCTCCA 360843
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| || || | ||||| |||| || ||||||||
Sbjct 360817 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 360758
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| ||||| || || ||||| || |||||
Sbjct 360757 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 360698
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||||||||| || | || || | ||||| | ||| |||||
Sbjct 360697 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACACTTTCCGACTACAAC 360638
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || ||||| || |||||||
Sbjct 360637 ATCCAGAAGGAGTCGACGCTCCACCTAGTGCT 360606
>seq190
Length=701213
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| ||||||| || ||||||| |||| |||||||||||
Sbjct 551602 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCG 551661
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| || || || || || || || |||||
Sbjct 551662 GACACTATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGAATCCCTCCCGACCAG 551721
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | ||||| || || || || | || |||| || || | || |||||
Sbjct 551722 CAGCGTCTCATTTTCGCAGGAAAGCAGCTCGAGGATGGCCGTACCCTCTCGGACTACAAC 551781
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || ||||| || || ||
Sbjct 551782 ATCCAGAAGGAATCGACTCTTCA 551804
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || | ||||| |||| || ||||||||
Sbjct 552286 ATGCAGATTTTCGTCAAGACGCTCACTGGAAAGACGATCACTCTCGAGGTCGAGTCGTCG 552345
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| | || || | ||| ||||| || || || || |||||
Sbjct 552346 GACACGATCGACAACGTCA---AGGCCAAGATTCAG-GACAAGGAGGGTATCCCTCCTGA 552401
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||||| | || ||||||||||| || | || |||| |||||| | || ||
Sbjct 552402 CCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTA 552461
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || || || |||||| || | |||||
Sbjct 552462 CAACATCCAGAAGGAGAGCACGCTGCACCTCGTGCT 552497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326959606555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |