Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq166 178 1e-39 >seq166 Length=36299 Score = 178 bits (196), Expect = 1e-39 Identities = 381/566 (67%), Gaps = 5/566 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||||||||||||||| || | || ||||| || || || | ||| ||| ||| || | Sbjct 24061 GCACGCAAAGTCGGTGTGAAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAG 24002 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||||||||| || || |||||||| || || ||||| Sbjct 24001 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAACGAGCCGGAGAAAAA 23942 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || || || ||||| ||||| || || | || ||||| ||| | ||| | ||| Sbjct 23941 GATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCGGCGAAAGTGGCGCGACGGTCGCT 23882 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| | ||||| ||||| || ||||| | || | || |||| |||| Sbjct 23881 GATCCAGCGGAGCGCCCAGTCGGCCTTCTTCTTGACGACGGGGATGGTCTCGACGGCGTC 23822 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||| ||| || |||| || | || || ||||| || ||||| | || || || | Sbjct 23821 AAAGAGGAGCTCGCGCTGTTCGGGCTCGCGGATGTAAGTGTCGATGAGGAGCGAGTAGGT 23762 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || || |||| |||||||| || ||||| |||||||| || | || || | | Sbjct 23761 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCTGCGGC 23702 Query 93451 CTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 ||| || || ||| || | ||| || || || || ||||| || ||||| || || | Sbjct 23701 CTGGACCTC-GGAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCATCCGAAGCGG 23643 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCC 93566 | || || || | | ||| ||||| || ||| | || || ||| || |||| Sbjct 23642 CGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCC 23583 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | ||| || || || || ||||||| || ||| | ||||| || || || || || | Sbjct 23582 AGTCGTGGAGGTCCTTGGAGAGATCGATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCT 23523 Query 93627 TTTTGTACATATCCCATATGTCTTGA 93652 | |||||||| | ||| || | |||| Sbjct 23522 TCTTGTACATTTGCCAGATCTGTTGA 23497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859428730280