Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq190 84.2 2e-11 seq185 84.2 2e-11 >seq190 Length=701213 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || || ||||||||||||||||||||||| |||||||| || | || || Sbjct 552275 AGTCGGAGGACGAGATGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTACGA 552216 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||||||||| || |||| |||||||| || || | || ||| Sbjct 552215 CCATCTTCGAGTTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCC 552156 Query 34030 TTGTCC 34035 |||||| Sbjct 552155 TTGTCC 552150 Score = 82.4 bits (90), Expect = 6e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| |||||||| || || ||||||||||||||||| |||||||| || | Sbjct 552512 CCGCCACGCAGACGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 552453 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || | || || | |||||||||||||| || || |||||||| || Sbjct 552452 AGAGTG-CGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTC 552400 >seq185 Length=548418 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| |||||||| || || ||||| ||||||||| |||||||| || | Sbjct 360590 ACCGCCACGCAGACGCAGCACTAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 360649 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || ||| || |||| || | |||||||||||||| || ||||||||||| || Sbjct 360650 -AAGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTC 360703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061446677994