Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq189 100 6e-16 >seq189 Length=677838 Score = 100 bits (110), Expect = 6e-16 Identities = 667/1043 (64%), Gaps = 54/1043 (5%) Strand=Plus/Minus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 |||||||| || || || ||| ||||||||||| |||| | | |||||| || Sbjct 383258 GTGAAAATGTAACGAGCCGAGGCGGCGTCCTTACCACCGAGCAAACGGGTACCGAATTGA 383199 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACG 297556 ||| |||| | | | |||| ||| ||||| |||||| | | ||||||||| ||| Sbjct 383198 CCCCTCGGCTCGAGCAAATTGACGTTGTTGCTACCGACAAAGTTCTGTGCAAGACCGACG 383139 Query 297557 ATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGG-CGCTATGCTCTGCAACGTAACC 297615 |||||| || ||||| || || || || |||| || ||| | | || ||| Sbjct 383138 ATGGTCATGGTGAGCGATGCATCTCCGTGATGGTAGGCCGTGGTGC-CAATGATGTGACC 383080 Query 297616 GCTGAACTGTGCAACCTTCACGTCG--GTCGTCAAATTGCGCTTGAAAGCTGAATATATC 297673 | || ||| || ||||| | ||| |||| | |||| ||||| | | | || Sbjct 383079 GACGAGCTGGGCGACCTTGATTTCGCCGTCGCC--CCTGCGGTTGAAGGTGCCAAAGATG 383022 Query 297674 ACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAG--AT 297731 || || || ||| || |||| ||| || ||| | || || ||| || | || | Sbjct 383021 ACCTTGCGCTGACCGGGCTTGAGACCGTCGACGGCGGAAGGGATGGAACG--CAAGTTGT 382964 Query 297732 CGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGG-GAACGGGAACCTCGGGC 297790 || | |||||| | || || ||||||| ||| ||||||| | | |||| | | Sbjct 382963 CGGCCATCGAGAAGAGGATGAGCTCCTTGTTGATAAAGTCGGCGTAGGGGATAGT-GTCG 382905 Query 297791 TTCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTC 297849 | |||||||| || | | || || | | || || || |||||||||||| || || Sbjct 382904 ATGTTGTGGTCGAGGTAGGTGCCGGGACGGAACTGGCG-CAGCCACTCCTTGCGGTCGTC 382846 Query 297850 GGC--TCGTGACTTGTTGAAAGAACGGTCAATGAGCTCTCCGGAATCGGAAGTCC----- 297902 ||| || | ||||||||| | |||| |||||||| | | || | |||| Sbjct 382845 GGCCTTCTT--CTTGTTGAAGGCGAGGTCGATGAGCTCGCGG---TC-GCCGTCCTTGGT 382792 Query 297903 -ACAT-AAACGTCTTCATGAGAGACTTCAGATTGCTGAAGTATTTTTTGGCATCTGCACT 297960 || | || | | |||| | | || || |||||| |||||||| || || Sbjct 382791 GACGTCGAAGGGCAGCATGTGCTTGTCCATTGCGCGGAAGTACTTTTTGGCGTC----CT 382736 Query 297961 GGAACTC----GTACCAAGCCCCTTAAAATACTTGGTCGTCCATTTCTT-CATATCTTGT 298015 || | || ||||| || ||||| || |||||| | |||| ||| | | |||| Sbjct 382735 GGGAGTCCGAGGTACCGAGACCCTTGAAGTACTTGATGCGCCATCCCTTGCCGTTGTTGT 382676 Query 298016 G-TCTTC--ACGAAGTCTTCGAAGTCAGGAAGACTGAAAAATTCTCTGACTTCT--TTTC 298070 | | || | ||||| | | | || || | |||| || | || || || | Sbjct 382675 GCTGCTCCTTCCAAGTCAT-GTACTCGGGGATGGTGAAGAA--CGAGAGCTCCTGCTTGC 382619 Query 298071 CCTTCCTGGCAACT-ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGA 298129 |||| | ||| | ||||| ||||||||||||| | ||| || || || | || Sbjct 382618 CCTTTGT-GCACTTGACGATGGGCGTGATGAACTCGACGAGGAAGCCGGGGATCTTGAGC 382560 Query 298130 AGATTAGGGAAACAGCTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCA 298189 || || | || | || ||||| |||| |||||| ||||| | ||||| Sbjct 382559 AGCGACGGATAGAAGTGGTCGAGGAAGTTGATGATGAGACCCTTGATGTGCGAACCGTCG 382500 Query 298190 ACATCCGCGTCGGTCATGATCATCACATGACCGTAACGAAG--CGAGGACGTGTCTTTGT 298247 |||| |||||||||||||| | ||||| || || | ||| ||| || Sbjct 382499 TGATCCTGATCGGTCATGATCATGATGCTGCCGTAGCGCAGGCTGTTGAC--GTCGAGGT 382442 Query 298248 ACACTTTACCGGTTTGAAGGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCG 298307 || || ||| || || ||||| || | |||| ||| |||| || ||||||| Sbjct 382441 ACTGCTTTCCGTGCTGGAGACCGAGGATCTCCTTGATGGCTTTGATCTCGCTGTTCTTCA 382382 Query 298308 TGATGCTTGCCACG-GATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACT 298366 |||| || | | | || || |||||||| || | || || ||||| || ||||| || Sbjct 382381 TGAT-CTGGTCGTGCGAGGCCTCGCGGACGTTGAGCAGCTTACCACGGAGCGGGAAGACA 382323 Query 298367 CCATATCTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCC 298426 || || | |||||||||||| || || || | || || || | | || || || Sbjct 382322 CCGTAGTTGTCGCGACCGACCTCGACGAGACCGGAGACGGCGAGCGCCTTGGCCGAGTCA 382263 Query 298427 CCCTCCGTCAGAATGAGAGTGCA 298449 || || || || ||||| ||||| Sbjct 382262 CCTTCGGTGAGGATGAGGGTGCA 382240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877216261950