Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq186 107 2e-18 seq190 93.3 4e-14 seq166 84.2 2e-11 >seq186 Length=584883 Score = 107 bits (118), Expect = 2e-18 Identities = 401/624 (64%), Gaps = 11/624 (2%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 |||||||| || || || || ||||||||||||||||| | ||| | ||||| Sbjct 62080 AAGGTCGCAGAGCGCCCCCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAG 62139 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 |||||||| | ||| | ||| || ||| | | ||||| ||||| | || || ||||| Sbjct 62140 GACATCGAGAGCGCCATCGAGACCTACAACCTCATGTCGCAAAAGTACTTTACCCACGCT 62199 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 ||||| | ||| ||| ||||| | || ||| | || ||||| || | || Sbjct 62200 TCCCCCACCCTCTTCAACGCAGGCACCCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTC 62259 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGAT 123136 ||| || || ||| |||| ||| ||||| || || | | || ||||| |||| Sbjct 62260 ACCATGAAGGACGACTCCATCGACGGCATCTACGACACGCT-CAAGACGTGCGCCATGAT 62318 Query 123137 TTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG 123196 ||||| | |||||||| || | ||| | ||| | | | ||| ||| | Sbjct 62319 CTCCAAGACCGCGGGCGGCATCGGTCTCAACATCCACTGCATCCGCGGCACCGGCTCCTA 62378 Query 123197 CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAA 123256 ||| ||||| |||| || | ||| ||| ||||||| || || | ||| || Sbjct 62379 CATTGCCGGCACCAACGGCGTCAGCAACGGCATCGTCCCCATGCTCCGTGTCTTCAACAA 62438 Query 123257 CGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATCT 123313 | ||| || |||||||||||||||| ||| || ||||| | || ||||| | Sbjct 62439 CACCGCACGCTACGTCGACCAGGGCGGCAACAAGCGTCCCGGCGCCTTTGCCATCTACAT 62498 Query 123314 AGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGC---AACATGGGGGC 123370 || || |||||| || || | || || | | | ||| ||| || Sbjct 62499 TGAGCCCTGGCACTCGGACGTCTTTGAGTTCCTCGACCT---GCGCAAGAACCACGGCAA 62555 Query 123371 GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCG 123430 ||| || | |||||||| | || ||||| | ||||| ||||| | || ||| Sbjct 62556 GGAGGAGGTGCGTGCCCGCGAGCTCTTCTACGCGCTCTGGGTGCCCGACCTCTTCATGAA 62615 Query 123431 ACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAG 123490 ||||| | | |||||| |||||||||||||| ||| | ||||||||| | Sbjct 62616 GCGCGTCGAGCAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAATGTCCCGGCCTCGC 62675 Query 123491 CGACGTTTACGGCAATCAGTTTGA 123514 ||| |||||| | ||||||| Sbjct 62676 AGACTGCTACGGCGACGAGTTTGA 62699 >seq190 Length=701213 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || ||||| ||||| ||||| ||||| || || ||| Sbjct 552287 ATACCACCGCGGAGTCGGAGGACGAGATGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 552228 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | || ||| || | ||| || || ||| | |||||||| |||||||| | Sbjct 552227 --GACAGCGTACGACCATCTTCGAGTTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAG 552170 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || ||||| || || || || || || || | || | ||| |||||||||| Sbjct 552169 GGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTATCGGAAGACT 552110 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| || || | || ||||| || | || || || ||||| ||||| Sbjct 552109 CGACTTCCAGCGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 552058 >seq166 Length=36299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 138380 GCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTCAG 138439 ||||||||||| |||||| | || |||||||| ||||| || |||||| || || || Sbjct 24061 GCACGCAAAGTCGGTGTGAAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAG 24002 Query 138440 CCCCGGCATGACGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaaaa 138499 || ||||||| ||| |||||| | ||||||| || || ||| || ||||| Sbjct 24001 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAACGAGCCGGAGAAAAA 23942 Query 138500 aaCGCCTTCGACAATAGCGAAAGCCACCATGCGCACGGC 138538 | ||| ||||| || || || |||| |||| |||| Sbjct 23941 GATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCGGC 23903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002086942120