Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq190 147 5e-30 seq185 143 6e-29 seq191 127 5e-24 >seq190 Length=701213 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || ||||| ||||| || | || || | ||||||||| Sbjct 552038 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCG 551979 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| |||||||||||||| ||||| || Sbjct 551978 AGCTGCTTTCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGG 551919 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || |||||||| || || || ||||| | ||||| Sbjct 551918 ATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTG 551859 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 551858 CCGGTCAAGGTCTTGACGAAGATCTGCAT 551830 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||||||||| || || || || || ||||| || | || || | ||||| || Sbjct 551811 AACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCATCCTC 551752 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| |||||||| || || || || ||||| ||||| || || || || || || Sbjct 551751 GAGCTGCTTTCCTGCGAAAATGAGACGCTGCTGGTCGGGAGGGATTCCCTCCTTATCCTG 551692 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || || |||||||| ||||| || ||||| | ||||| Sbjct 551691 GATCTTGGCCTTGACGTTGTCGATAGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTT 551632 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || || || | ||||| Sbjct 551631 GCCGGTCAGAGTCTTGACAAAGATCTGCAT 551602 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || ||||| || | |||||| | ||||| ||| Sbjct 552494 ACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCG 552435 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| ||||| || || || ||||| ||| Sbjct 552434 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGA 552375 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || |||||||| || || || || || | ||||||| Sbjct 552374 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTT 552315 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 552314 CCAGTGAGCGTCTTGACGAAAATCTGCAT 552286 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| ||| ||| || || || ||||| |||| || || | ||||||||| Sbjct 552266 ACGAGATGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCATCTTCG 552207 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| | ||| || ||||| || || ||||| || ||||| || Sbjct 552206 AGTTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 552147 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || |||||||| || ||| || ||||| || || | ||||| Sbjct 552146 ATCTTGGCCTTCACATTGTCAATGGTATCGGAAGACTCGACTTCCAGCGTGATGGTCTTG 552087 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 552086 CCAGTCAAGGTCTTGACGAAAATCTGCAT 552058 >seq185 Length=548418 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | ||| || | || || ||| Sbjct 282520 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCG 282461 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||||||||| || || ||||| || || ||||| || ||||| || Sbjct 282460 AGCTGCTTACCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 282401 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||||||| ||||| |||||||| | ||||| Sbjct 282400 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTA 282341 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 282340 CCCGTAAGGGTCTTGACAAAGATCTGCAT 282312 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| ||| || | || || ||| Sbjct 360609 ACTAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCG 360668 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || ||||| || || ||||| || Sbjct 360669 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGG 360728 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || ||||| | |||||| Sbjct 360729 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 360788 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 360789 CCCGTCAGCGTCTTGACGAAGATCTGCAT 360817 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || || || ||||| || | ||||| | ||||| ||| Sbjct 360837 ACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCG 360896 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || ||||| || || ||||| || Sbjct 360897 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGG 360956 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || |||||||| ||||| || || || ||||| | || || Sbjct 360957 ATCTTGGCCTTGACATTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATGGTTTTG 361016 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | ||||| Sbjct 361017 CCAGTGAGAGTCTTGACAAAGATCTGCAT 361045 >seq191 Length=731470 Score = 127 bits (140), Expect = 5e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | || || | || || ||| Sbjct 493851 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCG 493792 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 493791 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 493732 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| ||||| |||||||| | ||||| Sbjct 493731 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTCTTA 493672 Query 195112 CCTGT 195116 ||||| Sbjct 493671 CCTGT 493667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478799599099