Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq190 114 8e-21 seq185 114 8e-21 >seq190 Length=701213 Score = 114 bits (126), Expect = 8e-21 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||||||||| | || |||| || ||||| || ||| Sbjct 552482 GTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 552423 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || || |||||||| | || | ||||||||||| |||||| ||| Sbjct 552422 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTGGCCTTG 552363 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | |||| || | ||| || |||| || || || ||||| ||||| ||| Sbjct 552362 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTTCCAGTGAGCGTC 552303 Query 34965 TTCACAAAGATCTGCATA 34982 || || || ||||||||| Sbjct 552302 TTGACGAAAATCTGCATA 552285 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| || ||| ||||| ||||| |||||||| ||| | || |||| || Sbjct 551811 AACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCATCCTC 551752 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| || || || || || |||||||| | || | |||||||| || Sbjct 551751 GAGCTGCTTTCCTGCGAAAATGAGACGCTGCTGGTCGGGAGGGATTCCCTCCTTATCCTG 551692 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCGGC--CTCAACATCGACGGTTATGG 34947 ||||| |||||| | ||||| | ||| | ||| || |||| ||| |||| Sbjct 551691 GATCTTGGCCTTGACGT----TGTCGATAGTGTCCGACGACTCCACCTCGAGGGTGATGG 551636 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || |||||||| |||||||||||||| Sbjct 551635 TCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 551602 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| | || |||| || ||||| ||||| ||||| Sbjct 552020 TCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCGAGCTGCTTTCCCGCAAAG 551961 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| ||||| || Sbjct 551960 ATGAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT 551903 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | ||| || |||| ||| ||||| || || || | ||||| Sbjct 551902 --TGTCGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTT 551845 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 551844 GACGAAGATCTGCATA 551829 >seq185 Length=548418 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| || ||||| || |||||||| Sbjct 360855 TCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 360914 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| Sbjct 360915 ATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 360974 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| |||||||| || ||||||||||| ||| Sbjct 360975 TCAATGGTATCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACA 361034 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 361035 AAGATCTGCAT 361045 Score = 98.7 bits (108), Expect = 6e-16 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||||||| | || | || || ||||| || ||||| || Sbjct 282502 TCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAG 282443 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| Sbjct 282442 ATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC---- 282387 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| | ||| || || | ||| ||||| || ||||| || ||||| Sbjct 282386 GTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTAAGGGTCTT 282327 Query 34967 CACAAAGATCTGCATATT 34984 |||||||||||||| || Sbjct 282326 GACAAAGATCTGCATCTT 282309 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||||| | || | || || ||||| || |||||||| Sbjct 360627 TCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 360686 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| Sbjct 360687 ATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGAC---- 360742 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| | ||| || |||| ||| || || || ||||| || ||||| Sbjct 360743 GTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTCAGCGTCTT 360802 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 360803 GACGAAGATCTGCAT 360817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632820575016