Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq190 100 2e-16 seq185 100 2e-16 >seq190 Length=701213 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || |||||| | ||||||| ||| | || || ||||||||||| || ||||| || || Sbjct 552516 GTTGCCGCCACGCAGACGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTC 552457 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 ||||| || || | || || || || || |||||||| || | |||||| ||||| || Sbjct 552456 CGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGG 552397 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCT 34654 || | ||||||||||| ||| || | || ||| | || ||||| || Sbjct 552396 AGGGATACCCTCCTTGTC-CTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACT 552338 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || | || ||||| || || || | ||| || || ||||||||||| Sbjct 552337 CGACCTCGAGAGTGATCGTCTTTCCAGTGAGCGTCTTGACGAAAATCTGCAT 552286 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| || ||||||||||| || ||||| || || || || || || | ||||| ||||| Sbjct 552261 ATGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCATCTTCGAGTTG 552202 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || ||||| ||||| || || | ||||||||||| |||||| Sbjct 552201 CTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 552142 Query 34623 TTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | || || | ||| || || ||| ||||||| || || || || || | Sbjct 552141 G-GCCTTCACATTGTCAATGGTATCGGAAGACTCGACTTCCAGCGTGATGGTCTTGCCAG 552083 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || ||||||||||| Sbjct 552082 TCAAGGTCTTGACGAAAATCTGCAT 552058 >seq185 Length=548418 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||||| ||| | ||||| || |||||| || ||||| || || ||| Sbjct 360591 CCGCCACGCAGACGCAGCACTAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 360650 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || |||| || || || || |||||||| || | ||||| ||||| || || Sbjct 360651 AGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGA 360710 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | || ||||| ||| || Sbjct 360711 ATACCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGAC 360769 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| ||||| || || || | ||| || || || ||||||||| Sbjct 360770 CTCGAGGGTGATCGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATG 360818 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || ||||| || || ||||| || || |||| || || || Sbjct 282514 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGC 282455 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 |||||||| || || | ||||| ||||| || || | ||||||||||| |||| || Sbjct 282454 TTACCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC-TT 282396 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| |||||| || | ||| || || ||||| || Sbjct 282395 GGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGT 282336 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGAT 34712 | || || ||||| |||||||| ||||| Sbjct 282335 AAGGGTCTTGACAAAGATCTGCATCTTGAT 282306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728844353901