Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq190 109 5e-19 seq185 105 6e-18 seq191 87.8 2e-12 >seq190 Length=701213 Score = 109 bits (120), Expect = 5e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 ||||||||||| ||||| || ||||||||||||||| | || || || || ||||| || Sbjct 551599 GCCATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCG 551658 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || ||| | || || | ||||| || || || || || || || || || ||||| Sbjct 551659 TCGGACACTATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGAATCCCTCCCGAC 551718 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || |||||| | || | ||| || || || | || || | ||| | || || ||| Sbjct 551719 CAGCAGCGTCTCATTTTCGCAGGAAAGCAGCTCGAGGATGGCCGTACCCTCTCGGACTAC 551778 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||||| | || | ||| | || |||| ||||| || Sbjct 551779 AACATCCAGAAGGAATCGACTCTTCACCTCGTTCTCCGCCTGCGTGGTGGTAT 551831 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || |||| Sbjct 551830 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCG 551889 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| |||||||| || ||||| || Sbjct 551890 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAG 551949 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || | ||||| | ||| | || || |||||| Sbjct 551950 CAGCGCCTCATCTTTGCGGGAAAGCAGCTCGAAGATGGCCGCACCCTGTCTGACTACAAC 552009 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | || | || ||||| | || ||||| || Sbjct 552010 ATTCAGAAGGAGTCCACCCTCCACCTCGTCCTGCGTCTCCGCGGTGGTAT 552059 >seq185 Length=548418 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || || || || || || |||| Sbjct 360818 CATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 360759 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || ||||| || || || || ||||| || Sbjct 360758 GGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCA 360699 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | |||||||| || | || ||| | || ||||||| ||||| Sbjct 360698 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACACTTTCCGACTACAA 360639 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || ||||||||||| | || | || ||||| |||| || || Sbjct 360638 CATCCAGAAGGAGTCGACGCTCCACCTAGTGCTGCGTCTGCGTGGCGG 360591 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| | || || ||||| ||||| | || Sbjct 282312 ATGCAGATCTTTGTCAAGACCCTTACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCG 282371 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || || || || Sbjct 282372 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 282431 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || ||| | || |||| || |||||| Sbjct 282432 CAGCGCCTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACGCTTTCGGACTACAAC 282491 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||||||| | || | || | || |||| ||||| Sbjct 282492 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTCCGCCTGCGTGGTGG 282538 >seq191 Length=731470 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || || ||| | || || ||||| ||||| | || ||| | || || | ||||| Sbjct 493667 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCCTCGGACACCATCGACAACGTCAAGGCC 493726 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| || ||||| || ||||| || ||||| | || | ||||||||| Sbjct 493727 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGCAAG 493786 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || ||| | || | || || |||||||| || |||||||||||| | || Sbjct 493787 CAGCTCGAGGACGGCCGCACGCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 493846 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || | ||| |||| ||||| || Sbjct 493847 CTCGTGCTCCGTCTGCGTGGTGGTAT 493872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917329013440